Evidence map›Paper›PMID 35516306›Full record

ArticleRSC advances2019

Alpha-hemolysin nanopore allows discrimination of the microcystins variants.

Janilson J S Júnior, Thereza A Soares, Laércio Pol-Fachin, Dijanah C Machado, Victor H Rusu, Juliana P Aguiar, Cláudio G Rodrigues

Open access · goldAbstract read
In one paragraph

Article in RSC advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Janilson J S JúniorDepartamento de Biofísica e Radiobiologia, Universidade Federal de Pernambuco Avenida Prof. Moraes Rego, s/n, Cidade Universitária Recife Pernambuco 50670-901 Brazil cgrufpe@gmail.com +55 81 2126 8560 +55 81 2126 8535.
Thereza A SoaresDepartamento de Química Fundamental, Universidade Federal de Pernambuco Cidade Universitária 50740-560 Recife PE Brazil.ORCID https://orcid.org/0000-0002-5891-6906
Laércio Pol-FachinDepartamento de Química Fundamental, Universidade Federal de Pernambuco Cidade Universitária 50740-560 Recife PE Brazil.
Dijanah C MachadoDepartamento de Biofísica e Radiobiologia, Universidade Federal de Pernambuco Avenida Prof. Moraes Rego, s/n, Cidade Universitária Recife Pernambuco 50670-901 Brazil cgrufpe@gmail.com +55 81 2126 8560 +55 81 2126 8535.
Victor H RusuDepartamento de Química Fundamental, Universidade Federal de Pernambuco Cidade Universitária 50740-560 Recife PE Brazil.
Juliana P AguiarDepartamento de Biofísica e Radiobiologia, Universidade Federal de Pernambuco Avenida Prof. Moraes Rego, s/n, Cidade Universitária Recife Pernambuco 50670-901 Brazil cgrufpe@gmail.com +55 81 2126 8560 +55 81 2126 8535.
Cláudio G RodriguesDepartamento de Biofísica e Radiobiologia, Universidade Federal de Pernambuco Avenida Prof. Moraes Rego, s/n, Cidade Universitária Recife Pernambuco 50670-901 Brazil cgrufpe@gmail.com +55 81 2126 8560 +55 81 2126 8535.ORCID https://orcid.org/0000-0001-9015-5644
Universidade Federal de Pernambuco · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microcystins (MCs) are a class of cyclic heptapeptides with more than 100 variants produced by cyanobacteria present in surface waters. MCs are potent hepatotoxic agents responsible for fatal poisoning in animals and humans. Several techniques are employed in the detection of MCs, however, there is a shortage of methods capable of discriminating variants of MCs. In this work we demonstrate that the α-hemolysin (αHL) nanopore can detect and discriminate the variants (LR, YR and RR) of MCs in aqueous solution. The discrimination process is based on the analysis of the residence times of each variant of MCs within the unitary nanopore, as well as, on the amplitudes of the blockages in the ionic current flowing through it. Simulations of molecular dynamics and calculation of the electrostatic potential revealed that the variants of MCs present different charge distribution and correlated with the three patterns on the amplitudes of the blockages in the ionic current. Additionally, molecular docking analysis indicates different patterns of interaction of the variants of MCs with two specific regions of the nanopore. We conclude that αHL nanopore can discriminate variants of microcystins by a mechanism based mainly on electrostatic interaction. Finally, we propose the use of nanopore-based technology as a promising method for analyzing microcystins in aqueous solutions.

Identifiers

PMID35516306
PMCPMC9064141
OpenAlexW2943919628

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.