Evidence map›Paper›PMID 35514164›Full record

ArticleJournal of enzyme inhibition and medicinal chemistry2022

Phosphorus containing analogues of SAHA as inhibitors of HDACs.

Michael D Pun, Hsin-Hua Wu, Feyisola P Olatunji, Britany N Kesic, John W Peters, Clifford E Berkman

Open access · goldAbstract read
In one paragraph

Article in Journal of enzyme inhibition and medicinal chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Michael D PunDepartment of Chemistry, Washington State University, Pullman, WA, USA.
Hsin-Hua WuDepartment of Chemistry, Washington State University, Pullman, WA, USA.
Feyisola P OlatunjiDepartment of Chemistry, Washington State University, Pullman, WA, USA.
Britany N KesicDepartment of Chemistry, Washington State University, Pullman, WA, USA.
John W PetersDepartment of Chemistry, Washington State University, Pullman, WA, USA.
Clifford E BerkmanDepartment of Chemistry, Washington State University, Pullman, WA, USA.
Washington State University · US

Funding

TRAINING IN BIOTECHNOLOGY: EMPHASIS ON PROTEIN CHEMISTRYT32GM008336 · NIGMS · WASHINGTON STATE UNIVERSITY · PI CALL, DOUGLAS R. · 1989 to 2023
$8.9M
Defining the mechanistic determinants of catalytic bias in cofactor-based enzymatic oxidation-reduction reactionsR01GM138592 · NIGMS · WASHINGTON STATE UNIVERSITY · PI PETERS, JOHN W · 2020 to 2023
$1.4M
MMP-14 Chimeric Ligands for Targeted Imaging of Metastatic TumorsR21CA185884 · NCI · WASHINGTON STATE UNIVERSITY · PI BERKMAN, CLIFFORD · 2015 to 2016
$360k
NCI NIH HHS R21 CA185884NIGMS NIH HHS R01 GM138592NIGMS NIH HHS T32 GM008336
6 · The paper itself

Abstract

Histone deacetylases (HDACs) are a family of enzymes responsible for regulating DNA transcription by modulating its binding to histone proteins. HDACs are overexpressed in several types of cancers and are recognised as drug targets. Vorinostat, or suberanilohydroxamic acid (SAHA), is an histone deacetylase (HDAC) inhibitor with a hydroxamic acid as a zinc-binding group (ZBG), and it has been FDA approved for the treatment of T-cell lymphoma. In this work, phosphorus-based SAHA analogues were synthesised to assess their zinc-binding effectiveness compared to the hydroxamic acid of SAHA. Specifically, we examined phosphate, phosphoramidate and phosphorothiolate groups as isosteres of the canonical hydroxamic acid motif of conventional HDAC inhibitors. The compounds were screened for binding to HDAC enzymes from HeLa cell lysate. The most potent derivatives were then screened against HDAC3 and HDAC8 isoforms. HDAC inhibition assays demonstrated that these phosphorus-based SAHA analogs exhibited slow binding to HDACs but with greater potency than phosphonate SAHA analogs examined previously. All compounds inhibited HDACs, the most potent having an IC

Indexed as

Histone DeacetylasesPhosphorusHeLa CellsHistone Deacetylase InhibitorsHumansHydroxamic AcidsRepressor ProteinsVorinostatZincHDAC8 protein, humanHistone Deacetylase InhibitorsHistone DeacetylasesHydroxamic AcidsPhosphorusRepressor ProteinsVorinostatZincHDACphosphatephosphoramidatephosphorothiolateSAHA

Identifiers

PMID35514164
PMCPMC9090410
OpenAlexW4229016496

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.