Evidence map›Paper›PMID 35510872›Full record

ArticleBioscience reports2022

A long non-coding RNA as a direct vitamin D target transcribed from the antisense strand of the human HSD17B2 locus.

Yoshiaki Kanemoto, Koichi Nishimura, Akira Hayakawa, Takahiro Sawada, Rei Amano, Jinichi Mori, Tomohiro Kurokawa, Yoshinori Murakami, Shigeaki Kato

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Vitamin D Reprograms Non-Coding RNA Networks to Block Zika Virus in Human Macrophages.Pathophysiology : the official journal of the International Society for Pathophysiology · 2026
    Article
  3. Article
  4. Natural antisense transcripts as drug targets.Frontiers in molecular biosciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Yoshiaki KanemotoDepartment of Medical Epigenetics, Research Institute of Innovative Medicine, Tokiwa Foundation, Iwaki, Fukushima, Japan.
Koichi NishimuraDepartment of Medical Epigenetics, Research Institute of Innovative Medicine, Tokiwa Foundation, Iwaki, Fukushima, Japan.
Akira HayakawaDepartment of Medical Epigenetics, Research Institute of Innovative Medicine, Tokiwa Foundation, Iwaki, Fukushima, Japan.
Takahiro SawadaDepartment of Medical Epigenetics, Research Institute of Innovative Medicine, Tokiwa Foundation, Iwaki, Fukushima, Japan.
Rei AmanoDepartment of Medical Epigenetics, Research Institute of Innovative Medicine, Tokiwa Foundation, Iwaki, Fukushima, Japan.
Jinichi MoriDepartment of Medical Epigenetics, Research Institute of Innovative Medicine, Tokiwa Foundation, Iwaki, Fukushima, Japan.
Tomohiro KurokawaDepartment of Medical Epigenetics, Research Institute of Innovative Medicine, Tokiwa Foundation, Iwaki, Fukushima, Japan.
Yoshinori MurakamiDivision of Molecular Pathology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan.
Shigeaki KatoDepartment of Medical Epigenetics, Research Institute of Innovative Medicine, Tokiwa Foundation, Iwaki, Fukushima, Japan.ORCID 0000-0002-5564-1695
IRYO Sosei University · JPFukushima Medical University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vitamin D (VD) exerts a wide variety of actions via gene regulation mediated by the nuclear vitamin D receptor (VDR) under physiological and pathological settings. However, the known target genes of VDR appear unlikely to account for all VD actions. We used in silico and transcriptomic approaches in human cell lines to search for non-coding RNAs transcriptionally regulated by VD directly. Four long non-coding RNAs (lncRNAs), but no microRNAs (miRNAs), were found, supported by the presence of consensus VDR-binding motifs in the coding regions. One of these lncRNAs (AS-HSD17β2) is transcribed from the antisense strand of the HSD17β2 locus, which is also a direct VD target. AS-HSD17β2 attenuated HSD17β2 expression. Thus, AS-HSD17β2 represents a direct lncRNA target of VD.

Indexed as

MicroRNAsRNA, Long NoncodingEstradiol DehydrogenasesHumansVitamin DVitaminsEstradiol DehydrogenasesHSD17B2 protein, humanMicroRNAsRNA, Long NoncodingVitamin DVitaminseukaryotic gene expressionlncRNAnon-coding RNAVDRvitamin D

Identifiers

PMID35510872
PMCPMC9142830
OpenAlexW4228999434

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.