Evidence map›Paper›PMID 35508617›Full record

ArticleScientific reports2022

Biliverdin regulates NR2E3 and zebrafish retinal photoreceptor development.

Blaine Connor, Kayla Titialii-Torres, Abigail E Rockenhaus, Samuel Passamonte, Ann C Morris, Young-Sam Lee

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Blaine Connor *Department of Biology, Johns Hopkins University, Baltimore, MD, 21218, USA.
Kayla Titialii-Torres *Department of Biology, University of Kentucky, Lexington, KY, 40506, USA.
Abigail E Rockenhaus *Department of Molecular and Cellular Biochemistry, University of Kentucky College of Medicine, Lexington, KY, 40536, USA.
Samuel PassamonteDepartment of Molecular and Cellular Biochemistry, University of Kentucky College of Medicine, Lexington, KY, 40536, USA.
Ann C MorrisDepartment of Biology, University of Kentucky, Lexington, KY, 40506, USA.
Young-Sam LeeDepartment of Molecular and Cellular Biochemistry, University of Kentucky College of Medicine, Lexington, KY, 40536, USA. young-sam.lee@uky.edu.
University of Kentucky · USJohns Hopkins University · US

Funding

Cellular and Molecular BiologyT32GM141804 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI John Kim · 2021 to 2026
$5.1M
Vertebrate photoreceptor development and regenerationR01EY021769 · NEI · UNIVERSITY OF KENTUCKY · PI MORRIS, ANN C · 2012 to 2022
$3.2M
NEI NIH HHS R01 EY021769NIH HHS R01EY021769NIH HHS T32GM141804
6 · The paper itself

Abstract

NR2E3 is an orphan nuclear receptor whose loss-of-function causes abnormal retinal photoreceptor development and degeneration. However, despite that many nuclear receptors are regulated by binding of small molecule ligands, biological small molecule ligands regulating NR2E3 have not been identified. Identification of an endogenous NR2E3 ligand might reveal a previously unrecognized component contributing to retinal development and maintenance. Here we report that biliverdin, a conserved green pigment from heme catabolism, regulates NR2E3 and is necessary for zebrafish retinal photoreceptor development. Biliverdin from retinal extracts specifically bound to NR2E3's ligand-binding domain and induced NR2E3-dependent reporter gene expression. Inhibition of biliverdin synthesis decreased photoreceptor cell populations in zebrafish larvae, and this phenotype was alleviated by exogenously supplied biliverdin. Thus, biliverdin is an endogenous small molecule ligand for NR2E3 and a component necessary for the proper development of photoreceptor cells. This result suggests a possible role of heme metabolism in the regulation of retinal photoreceptor cell development.

Indexed as

Retinal DegenerationZebrafishAnimalsBiliverdineHemeLigandsOrphan Nuclear ReceptorsPhotoreceptor CellsPhotoreceptor Cells, VertebrateReceptors, Cytoplasmic and NuclearZebrafish ProteinsBiliverdineHemeLigandsNr2e3 protein, zebrafishOrphan Nuclear ReceptorsReceptors, Cytoplasmic and NuclearZebrafish Proteins

Identifiers

PMID35508617
PMCPMC9068610
OpenAlexW4229057270

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.