Evidence map›Paper›PMID 35508492›Full record

ArticleScientific reports2022

MALDI mass spectrometry imaging workflow for the aquatic model organisms Danio rerio and Daphnia magna.

Elisabeth Schirmer, Sven Ritschar, Matthias Ochs, Christian Laforsch, Stefan Schuster, Andreas Römpp

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Mass Spectrometry Imaging.Analytical chemistry · 2025
    Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Elisabeth SchirmerBioanalytical Sciences and Food Analysis, University of Bayreuth, Bayreuth, Germany.
Sven RitscharAnimal Ecology I and BayCEER, University of Bayreuth, Bayreuth, Germany.
Matthias OchsBioanalytical Sciences and Food Analysis, University of Bayreuth, Bayreuth, Germany.
Christian LaforschAnimal Ecology I and BayCEER, University of Bayreuth, Bayreuth, Germany.
Stefan SchusterAnimal Physiology, University of Bayreuth, Bayreuth, Germany.
Andreas RömppBioanalytical Sciences and Food Analysis, University of Bayreuth, Bayreuth, Germany. andreas.roempp@uni-bayreuth.de.
University of Bayreuth · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lipids play various essential roles in the physiology of animals. They are also highly dependent on cellular metabolism or status. It is therefore crucial to understand to which extent animals can stabilize their lipid composition in the presence of external stressors, such as chemicals that are released into the environment. We developed a MALDI MS imaging workflow for two important aquatic model organisms, the zebrafish (Danio rerio) and water flea (Daphnia magna). Owing to the heterogeneous structure of these organisms, developing a suitable sample preparation workflow is a highly non-trivial but crucial part of this work and needs to be established first. Relevant parameters and practical considerations in order to preserve tissue structure and composition in tissue sections are discussed for each application. All measurements were based on high mass accuracy enabling reliable identification of imaged compounds. In zebrafish we demonstrate that a detailed mapping between histology and simultaneously determined lipid composition is possible at various scales, from extended structures such as the brain or gills down to subcellular structures such as a single axon in the central nervous system. For D. magna we present for the first time a MALDI MSI workflow, that demonstrably maintains tissue integrity during cryosectioning of non-preserved samples, and allows the mapping of lipids in the entire body and the brood chamber inside the carapace. In conclusion, the lipid signatures that we were able to detect with our method provide an ideal basis to analyze changes caused by pollutants in two key aquatic model organisms.

Indexed as

DaphniaWater Pollutants, ChemicalAnimalsAquatic OrganismsLipidsSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationWorkflowZebrafishLipidsWater Pollutants, Chemical

Identifiers

PMID35508492
PMCPMC9068711
OpenAlexW4225374974

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.