Evidence map›Paper›PMID 35507581›Full record

ArticlePloS one2022

Characterization and complete genome sequence analysis of a newly isolatedphage against Vibrio parahaemolyticus from sick shrimp in Qingdao, China.

Fengjuan Tian, Jing Li, Yunjia Hu, Feiyang Zhao, Huiying Ren, Qiang Pan, Amina Nazir, Fei Li, Yigang Tong

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Complete genome sequence ofMicrobiology resource announcements · 2024
    Article
  5. Characterization of a Vibriophage Infecting PathogenicInternational journal of molecular sciences · 2023
    Article
  6. Food science and biotechnology · 2023
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Fengjuan TianCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.
Jing LiCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.
Yunjia HuCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.
Feiyang ZhaoQingdao Phagepharm Bio-tech Co., Ltd, Shandong, China.
Huiying RenQingdao Phagepharm Bio-tech Co., Ltd, Shandong, China.
Qiang PanQingdao Phagepharm Bio-tech Co., Ltd, Shandong, China.
Amina NazirInstitute of Animal Science and Veterinary Medicine, Shandong Academy of Agricultural Sciences, Shandong Province, China.ORCID 0000-0003-3126-5864
Fei LiCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.
Yigang TongCollege of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.
Beijing University of Chemical Technology · CNQingdao University · CNShandong Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Foodborne diseases have become a serious havoc, where antimicrobial resistance is throwing significant challenges on daily basis. With the increase of drug-resistant bacteria and food-borne infection associated with Vibrio parahaemolyticus, new and effective strategies were needed to control the emergence of vibriosis. Lytic bacteriophages come up as a promising way to resist the pathogenic population in various applications. In this study, a V. parahaemolyticus specific phage vB_VpS_PG28 was isolated from sewage in the seafood market. Results showed vB_VpS_PG28, is strictly a lytic bacteriophage and has a relatively large burst size of 103 plaque-forming units per infected cell. Comparative genomic and bioinformatic analyses proved that vB_VpS_PG28 is a new bacteriophage that had a homologous relation with Vibrio phages of family Siphoviridae, especially with phage VH2_2019, but transmission electron microscopy of vB_VpS_PG28 morphology characterized its morphology is similar to that of Myoviridae family. In silico analysis indicated that the vB_VpS_PG28 genome consists of 82712 bp (48.08% GC content) encoding 114 putative ORFs without tRNA,and any gene associated with resistance or virulence factors has not been found. The bacteriophage in the present study has shown significant outcomes in order to control bacterial growth under in vitro conditions. Thus, we are suggesting a beneficiary agent against foodborne pathogens. Further, to ensure the safe usage of phage oral toxicity testing is recommended.

Indexed as

BacteriophagesVibrio parahaemolyticusAnimalsCrustaceaGenome, ViralPhylogenySeafoodSequence Analysis

Identifiers

PMID35507581
PMCPMC9067683
OpenAlexW4229041341

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.