Evidence map›Paper›PMID 35506764›Full record

ArticleActa crystallographica. Section F, Structural biology communications2022

Biochemical and crystallization analysis of the CENP-SX-DNA complex.

Sho Ito, Tatsuya Nishino

Open access · hybridAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 59% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sho ItoDepartment of Biological Science and Technology, Faculty of Advanced Engineering, Tokyo University of Science (TUS), 6-3-1 Niijyuku, Katsushika-ku, Tokyo 125-8585, Japan.
Tatsuya NishinoDepartment of Biological Science and Technology, Faculty of Advanced Engineering, Tokyo University of Science (TUS), 6-3-1 Niijyuku, Katsushika-ku, Tokyo 125-8585, Japan.ORCID 0000-0001-8017-8762
Tokyo University of Science · JP

Funding

Japan Agency for Medical Research and Development 1739Japan Society for the Promotion of Science 16K07279Japan Society for the Promotion of Science 20K06512National Institute of Genetics 2A2018National Institute of Genetics 6A2017National Institute of Genetics 85A2019Osaka University CR-17-05Osaka University CR-18-05Osaka University CR-19-05
6 · The paper itself

Abstract

The CENP-SX (MHF) complex is a conserved histone-fold protein complex that is involved in chromosome segregation and DNA repair. It can bind to DNA on its own as well as in complex with other proteins such as CENP-TW and FANCM to recognize specific substrates. CENP-SX binds nonspecifically to dsDNA, similar to other histone-fold proteins. Several low-resolution structures of CENP-SX in complex with DNA are known, but a high-resolution structure is still lacking. The DNA-binding properties of CENP-SX and FANCM-CENP-SX complexes with various lengths of dsDNA were compared and the band-shift patterns and migration positions were found to differ. To confirm the DNA-binding properties in detail, CENP-SX-DNA and FANCM-CENP-SX-DNA complexes were crystallized. Analysis of the crystals revealed that they all contained the CENP-SX-DNA complex, irrespective of the complex that was used in crystallization. Detailed diffraction data analyses revealed that there were two types of crystal with different space groups, P2

Indexed as

DNAHistonesCrystallizationCrystallography, X-RayDNA-Binding ProteinsDNADNA-Binding ProteinsHistonesCENP-SX–DNA complexchromosome segregationcrystallizationDNA repairhistone-fold complexesprotein–DNA interactions

Identifiers

PMID35506764
PMCPMC9067375
OpenAlexW4224307055

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.