Evidence map›Paper›PMID 35503477›Full record

ArticleHuman genetics2022

Monogenic causes of pigmentary mosaicism.

Ken Saida, Pin Fee Chong, Asuka Yamaguchi, Naka Saito, Hajime Ikehara, Eriko Koshimizu, Rie Miyata, Akira Ishiko, Kazuyuki Nakamura, Hidenori Ohnishi and 18 more

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Biallelic variants inBrain communications · 2025
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 14 institutions in 1 country.

Ken SaidaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.
Pin Fee ChongDepartment of Pediatric Neurology, Fukuoka Children's Hospital, Fukuoka, Japan.
Asuka YamaguchiDepartment of Pediatrics, Tokyo-Kita Medical Center, Tokyo, Japan.
Naka SaitoDepartment of Pediatrics, Tsuruoka Municipal Shonai Hospital, Yamagata, Japan.
Hajime IkeharaDepartment of Pediatrics, Chiba University Graduate School of Medicine, Chiba, Japan.
Eriko KoshimizuDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.
Rie MiyataDepartment of Pediatrics, Tokyo-Kita Medical Center, Tokyo, Japan.
Akira IshikoDepartment of Dermatology, Toho University School of Medicine, Tokyo, Japan.
Kazuyuki NakamuraDepartment of Pediatrics, Faculty of Medicine, Yamagata University, Yamagata, Japan.
Hidenori OhnishiDepartment of Pediatrics, Gifu University Graduate School of Medicine, Gifu, Japan.
Kei FujiokaCenter of General Internal Medicine and Rheumatology, Gifu Municipal Hospital, Gifu, Japan.
Takafumi SakakibaraDepartment of Pediatrics, Nara Medical University School of Medicine, Nara, Japan.
Hideo AsadaDepartment of Dermatology, Nara Medical University School of Medicine, Nara, Japan.
Kohei OgawaDepartment of Dermatology, Nara Medical University School of Medicine, Nara, Japan.
Kyoko KudoDepartment of Dermatology, Fukuoka Children's Hospital, Fukuoka, Japan.
Eri OhashiDivision of Neurology, National Center for Child Health and Development, Tokyo, Japan.
Michiko KawaiDivision of Neurology, National Center for Child Health and Development, Tokyo, Japan.
Yuichi AbeDivision of Neurology, National Center for Child Health and Development, Tokyo, Japan.
Naomi TsuchidaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.
Yuri UchiyamaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.
Kohei HamanakaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.
Atsushi FujitaDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.
Takeshi MizuguchiDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.
Satoko MiyatakeDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.
Noriko MiyakeDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan.
Mitsuhiro KatoDepartment of Pediatrics, Showa University School of Medicine, Shinagawa-ku, Tokyo, Japan.
Ryutaro KiraDepartment of Pediatric Neurology, Fukuoka Children's Hospital, Fukuoka, Japan.
Naomichi MatsumotoDepartment of Human Genetics, Yokohama City University Graduate School of Medicine, 3-9 Fukuura, Kanazawa-ku, Yokohama, 236-0004, Japan. naomat@yokohama-cu.ac.jp.ORCID http://orcid.org/0000-0001-9846-6500
Yokohama City University · JPFukuoka Children's Hospital and Medical Center for Infectious Diseases · JPNara Medical University · JPNational Center For Child Health and Development · JPYokohama City University Hospital · JPTokyo-Kita Medical Center · JPChiba University · JPGifu Municipal Hospital · JPGifu University · JPMunicipal Tsuruga Hospital · JPNational Center for Global Health and Medicine · JPShowa University · JPToho University · JPYamagata University · JP

Funding

Japan Agency for Medical Research and Development JP21ek0109486Japan Agency for Medical Research and Development JP21ek0109493Japan Agency for Medical Research and Development JP21ek0109549Japan Society for the Promotion of Science JP19H03621Japan Society for the Promotion of Science JP20K07907Japan Society for the Promotion of Science JP20K08164Japan Society for the Promotion of Science JP20K16932Japan Society for the Promotion of Science JP20K17428Japan Society for the Promotion of Science JP20K17936Japan Society for the Promotion of Science JP21K07869Japan Society for the Promotion of Science JP21k15907
6 · The paper itself

Abstract

Pigmentary mosaicism of the Ito type, also known as hypomelanosis of Ito, is a neurocutaneous syndrome considered to be predominantly caused by somatic chromosomal mosaicism. However, a few monogenic causes of pigmentary mosaicism have been recently reported. Eleven unrelated individuals with pigmentary mosaicism (mostly hypopigmented skin) were recruited for this study. Skin punch biopsies of the probands and trio-based blood samples (from probands and both biological parents) were collected, and genomic DNA was extracted and analyzed by exome sequencing. In all patients, plausible monogenic causes were detected with somatic and germline variants identified in five and six patients, respectively. Among the somatic variants, four patients had MTOR variant (36%) and another had an RHOA variant. De novo germline variants in USP9X, TFE3, and KCNQ5 were detected in two, one, and one patients, respectively. A maternally inherited PHF6 variant was detected in one patient with hyperpigmented skin. Compound heterozygous GTF3C5 variants were highlighted as strong candidates in the remaining patient. Exome sequencing, using patients' blood and skin samples is highly recommended as the first choice for detecting causative genetic variants of pigmentary mosaicism.

Indexed as

HypopigmentationMosaicismBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsHumansTOR Serine-Threonine KinasesUbiquitin ThiolesteraseBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsTOR Serine-Threonine KinasesUbiquitin ThiolesteraseUSP9X protein, human

Identifiers

PMID35503477
OpenAlexW4225402695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.