Evidence map›Paper›PMID 35502456›Full record

ArticleACS infectious diseases2022

Fused in Liposarcoma Protein, a New Player in the Regulation of HIV-1 Transcription, Binds to Known and Newly Identified LTR G-Quadruplexes.

Emanuela Ruggiero, Ilaria Frasson, Elena Tosoni, Matteo Scalabrin, Rosalba Perrone, Maja Marušič, Janez Plavec, Sara N Richter

Open access · hybridAbstract read
In one paragraph

Article in ACS infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
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  4. Review
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  7. Review
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  9. Article
  10. Targeting G-quadruplexes to achieve antiviral activity.Bioorganic & medicinal chemistry letters · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Emanuela RuggieroDepartment of Molecular Medicine, University of Padua, via Aristide Gabelli 63, Padua 35121, Italy.ORCID 0000-0003-0989-4074
Ilaria FrassonDepartment of Molecular Medicine, University of Padua, via Aristide Gabelli 63, Padua 35121, Italy.
Elena TosoniDepartment of Molecular Medicine, University of Padua, via Aristide Gabelli 63, Padua 35121, Italy.
Matteo ScalabrinDepartment of Molecular Medicine, University of Padua, via Aristide Gabelli 63, Padua 35121, Italy.
Rosalba PerroneBuck Institute for Research on Aging, 8001 Redwood Boulevard, Novato, California 94945, United States.
Maja MarušičSlovenian NMR Center, National Institute of Chemistry, Hajdrihova, 19, Ljubljana SI-1000, Slovenia.
Janez PlavecSlovenian NMR Center, National Institute of Chemistry, Hajdrihova, 19, Ljubljana SI-1000, Slovenia.ORCID 0000-0003-1570-8602
Sara N RichterDepartment of Molecular Medicine, University of Padua, via Aristide Gabelli 63, Padua 35121, Italy.ORCID 0000-0002-5446-9029
University of Padua · ITNational Institute of Chemistry · SIBuck Institute for Research on Aging · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HIV-1 integrated long terminal repeat (LTR) promoter activity is modulated by folding of its G-rich region into non-canonical nucleic acids structures, such as G-quadruplexes (G4s), and their interaction with cellular proteins. Here, by a combined pull-down/mass spectrometry/Western-blot approach, we identified the fused in liposarcoma (FUS) protein and found it to preferentially bind and stabilize the least stable and bulged LTR G4, especially in the cell environment. The outcome of this interaction is the down-regulation of viral transcription, as assessed in a reporter assay with LTR G4 mutants in FUS-silencing conditions. These data indicate that the complexity and dynamics of HIV-1 LTR G4s are much greater than previously envisaged. The G-rich LTR region, with its diverse G4 landscape and multiple cell protein interactions, stands out as prime sensing center for the fine regulation of viral transcription. This region thus represents a rational antiviral target for inhibiting both the actively transcribing and latent viruses.

Indexed as

G-QuadruplexesHIV-1HIV Long Terminal RepeatHumansPromoter Regions, GeneticRNA-Binding Protein FUSRNA-Binding Protein FUSFUSG-quadruplexHIV-1LTR promoterviral transcription

Identifiers

PMID35502456
PMCPMC9112328
OpenAlexW4225392341

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.