Evidence map›Paper›PMID 35501644›Full record

ArticleBulletin of experimental biology and medicine2022

The Role of Long Non-Coding RNA CCAT1 and SNHG14 in Activation of Some Protein-Coding Genes Associated with the Development of Ovarian Cancer.

O I Brovkina, I V Pronina, A M Burdennyy, L A Uroshlev, E A Filippova, M V Fridman, T P Kazubskaya, K I Zhordania, V I Loginov, N E Kushlinskii and 1 more

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Article in Bulletin of experimental biology and medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

O I BrovkinaResearch Institute of General Pathology and Pathophysiology, Moscow, Russia. brov.olia@gmail.com.
I V ProninaResearch Institute of General Pathology and Pathophysiology, Moscow, Russia.
A M BurdennyyResearch Institute of General Pathology and Pathophysiology, Moscow, Russia.
L A UroshlevResearch Institute of General Pathology and Pathophysiology, Moscow, Russia.
E A FilippovaResearch Institute of General Pathology and Pathophysiology, Moscow, Russia.
M V FridmanN. I. Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, Russia.
T P KazubskayaN. N. Blokhin National Medical Research Center of Oncology, Ministry of Health of the Russian Federation, Moscow, Russia.
K I ZhordaniaN. N. Blokhin National Medical Research Center of Oncology, Ministry of Health of the Russian Federation, Moscow, Russia.
V I LoginovResearch Institute of General Pathology and Pathophysiology, Moscow, Russia.
N E KushlinskiiN. N. Blokhin National Medical Research Center of Oncology, Ministry of Health of the Russian Federation, Moscow, Russia.
E A BragaResearch Institute of General Pathology and Pathophysiology, Moscow, Russia.
Research Institute of General Pathology and Pathophysiology, the Russian Academy of Medical Sciences · RUMinistry of Health of the Russian Federation · RUVavilov Institute of General Genetics · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Late diagnosis of ovarian cancer is one of the most important problems in its treatment. Long non-coding RNA (lncRNA) are a poorly studied, but promising type of diagnostic biomarkers. We studied the lncRNA interactome to identify biomarkers with potential significance for molecular diagnostics of ovarian cancer. By screening the TCGA database, we identified differentially expressed lncRNA CCAT1 and SNHG14. Based on the indices of complementarity of CCAT1 and SNHG14 to the mRNA sequences, we selected 5 protein-coding genes MAPK1, c-MET, TGFB2, SNAIL1, and WNT4 associated with the epithelial-mesenchymal transition. Real-time PCR on 54 ovarian cancer samples confirmed the high expression levels of CCAT1 and SNHG14 (logFC>1.5, p<0.05). A positive correlation between the expression levels of two lncRNA and mRNA of 5 genes in 6 pairs was established. The activating effect of CCAT1 and SNHG14 on the expression of these genes can be mediated by miR-203 and miR-124.

Indexed as

MicroRNAsOvarian NeoplasmsRNA, Long NoncodingCarcinoma, Ovarian EpithelialCell ProliferationFemaleHumansRNA, Messengerlong non-coding RNA CCAT2, humanMicroRNAsMIRN203 microRNA, humanRNA, Long NoncodingRNA, Messengerbiomarkersepithelial-mesenchymal transitionlong non-coding RNAmicroRNAovarian cancer

Identifiers

PMID35501644
OpenAlexW4225276701

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.