Evidence map›Paper›PMID 35501288›Full record

ArticleChembiochem : a European journal of chemical biology2022

Protein-Protein Recognition Involved in the Intermodular Transacylation Reaction in Modular Polyketide Synthase in the Biosynthesis of Vicenistatin.

Taichi Chisuga, Akimasa Miyanaga, Tadashi Eguchi

Open access · hybridAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Taichi ChisugaDepartment of Chemistry, Tokyo Institute of Technology, 2-12-1 O-okayama Meguro-ku, Tokyo, 152-8551, Japan.
Akimasa MiyanagaDepartment of Chemistry, Tokyo Institute of Technology, 2-12-1 O-okayama Meguro-ku, Tokyo, 152-8551, Japan.ORCID 0000-0003-2219-6051
Tadashi EguchiDepartment of Chemistry, Tokyo Institute of Technology, 2-12-1 O-okayama Meguro-ku, Tokyo, 152-8551, Japan.ORCID 0000-0002-7830-7104
Tokyo Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ketosynthase (KS) domain is a core domain found in modular polyketide synthases (PKSs). To maintain the polyketide biosynthetic fidelity, the KS domain must only accept an acyl group from the acyl carrier protein (ACP) domain of the immediate upstream module even when they are separated into different polypeptides. Although it was reported that both the docking domain-based interactions and KS-ACP compatibility are important for the interpolypeptide transacylation reaction in 6-deoxyerythronolide B synthase, it is not clear whether these findings are broadly applied to other modular PKSs. Herein, we describe the importance of protein-protein recognition in the intermodular transacylation between VinP1 module 3 and VinP2 module 4 in vicenistatin biosynthesis. We compared the transacylation activity and crosslinking efficiency of VinP2 KS

Indexed as

Acyl Carrier ProteinPolyketide SynthasesAminoglycosidesLactamsMacrolidesAcyl Carrier ProteinAminoglycosidesLactamsMacrolidesPolyketide Synthasesvicenistatinacyl carrier proteinbiosynthesisketosynthasespolyketide synthasesprotein-protein interactions

Identifiers

PMID35501288
PMCPMC9401018
OpenAlexW4225329823

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.