Evidence map›Paper›PMID 35500281›Full record

ArticleJournal of agricultural and food chemistry2022

Fermentative Indole Production via Bacterial Tryptophan Synthase Alpha Subunit and Plant Indole-3-Glycerol Phosphate Lyase Enzymes.

Lenny Ferrer, Melanie Mindt, Maria Suarez-Diez, Tatjana Jilg, Maja Zagorščak, Jin-Ho Lee, Kristina Gruden, Volker F Wendisch, Katarina Cankar

Open access · hybridAbstract read
In one paragraph

Article in Journal of agricultural and food chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 36 citations in OpenAlex.

  1. Effects ofFood chemistry: X · 2026
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  6. Understanding metabolic diversification in plants: branchpoints in the evolution of specialized metabolism.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Lenny FerrerGenetics of Prokaryotes, Faculty of Biology & CeBiTec, Bielefeld University, 33615 Bielefeld, Germany.ORCID 0000-0002-9305-1864
Melanie MindtWageningen Plant Research, Wageningen University & Research, 6708PB Wageningen, The Netherlands.ORCID 0000-0003-1530-5555
Maria Suarez-DiezLaboratory of Systems and Synthetic Biology, Wageningen University & Research, 6708WE Wageningen, The Netherlands.ORCID 0000-0001-5845-146X
Tatjana JilgGenetics of Prokaryotes, Faculty of Biology & CeBiTec, Bielefeld University, 33615 Bielefeld, Germany.
Maja ZagorščakDepartment of Biotechnology and Systems Biology, National Institute of Biology, 1000 Ljubljana, Slovenia.ORCID 0000-0002-1669-6482
Jin-Ho LeeDepartment of Food Science & Biotechnology, Kyungsung University, 608-736 Busan, Republic of Korea.
Kristina GrudenDepartment of Biotechnology and Systems Biology, National Institute of Biology, 1000 Ljubljana, Slovenia.
Volker F WendischGenetics of Prokaryotes, Faculty of Biology & CeBiTec, Bielefeld University, 33615 Bielefeld, Germany.ORCID 0000-0003-3473-0012
Katarina CankarWageningen Plant Research, Wageningen University & Research, 6708PB Wageningen, The Netherlands.ORCID 0000-0001-5149-4192
Bielefeld University · DEWageningen University & Research · NLNational Institute of Biology · SIKyungsung University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Indole is produced in nature by diverse organisms and exhibits a characteristic odor described as animal, fecal, and floral. In addition, it contributes to the flavor in foods, and it is applied in the fragrance and flavor industry. In nature, indole is synthesized either from tryptophan by bacterial tryptophanases (TNAs) or from indole-3-glycerol phosphate (IGP) by plant indole-3-glycerol phosphate lyases (IGLs). While it is widely accepted that the tryptophan synthase α-subunit (TSA) has intrinsically low IGL activity in the absence of the tryptophan synthase β-subunit, in this study, we show that

Indexed as

LyasesTryptophan SynthaseAnimalsFermentationGlycerophosphatesIndolesGlycerophosphatesindoleglycerol phosphateIndolesLyasesTryptophan SynthasebioprospectingCorynebacterium glutamicumfermentative productionindoleindole-3-glycerol phosphate lyasetryptophan synthase α-subunit

Identifiers

PMID35500281
PMCPMC9100643
OpenAlexW4225304626

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.