Evidence map›Paper›PMID 35499659›Full record

ArticleExtremophiles : life under extreme conditions2022

Fungal diversity in a sediment core from climate change impacted Boeckella Lake, Hope Bay, north-eastern Antarctic Peninsula assessed using metabarcoding.

Luiz Henrique Rosa, Mayara Baptistucci Ogaki, Juan Manuel Lirio, Rosemary Vieira, Silvia H Coria, Otávio Henrique Bezerra Pinto, Micheline Carvalho-Silva, Peter Convey, Carlos Augusto Rosa, Paulo Eduardo Aguiar Saraiva Câmara

Abstract read
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In one paragraph

Article in Extremophiles : life under extreme conditions, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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  8. Communities of culturable freshwater fungi present in Antarctic lakes and detection of their low-temperature-active enzymes.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Luiz Henrique RosaLaboratório de Microbiologia Polar e Conexões Tropicais, Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, PO Box 486, Belo Horizonte, MG, 31270-901, Brazil. lhrosa@icb.ufmg.br.
Mayara Baptistucci OgakiLaboratório de Microbiologia Polar e Conexões Tropicais, Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, PO Box 486, Belo Horizonte, MG, 31270-901, Brazil.
Juan Manuel LirioInstituto Antártico Argentino, Buenos Aires, Argentina.
Rosemary VieiraInstituto de Geociências, Universidade Federal Fluminense, Niterói, RJ, Brazil.
Silvia H CoriaInstituto Antártico Argentino, Buenos Aires, Argentina.
Otávio Henrique Bezerra PintoDepartamento de Biologia Celular, Universidade de Brasília, Brasília, Brazil.
Micheline Carvalho-SilvaDepartamento de Botânica, Universidade de Brasília, Brasília, Brazil.
Peter ConveyBritish Antarctic Survey, NERC, High Cross, Madingley Road, Cambridge, CB3 0ET, UK.
Carlos Augusto RosaLaboratório de Microbiologia Polar e Conexões Tropicais, Departamento de Microbiologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, PO Box 486, Belo Horizonte, MG, 31270-901, Brazil.
Paulo Eduardo Aguiar Saraiva CâmaraDepartamento de Botânica, Universidade de Brasília, Brasília, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We studied the fungal DNA present in a lake sediment core obtained from Trinity Peninsula, Hope Bay, north-eastern Antarctic Peninsula, using metabarcoding through high-throughput sequencing (HTS). Sequences obtained were assigned to 146 amplicon sequence variants (ASVs) primarily representing unknown fungi, followed by the phyla Ascomycota, Rozellomycota, Basidiomycota, Chytridiomycota and Mortierellomycota. The most abundant taxa were assigned to Fungal sp., Pseudeurotium hygrophilum, Rozellomycota sp. 1, Pseudeurotiaceae sp. 1 and Chytridiomycota sp. 1. The majority of the DNA reads, representing 40 ASVs, could only be assigned at higher taxonomic levels and may represent taxa not currently included in the sequence databases consulted and/or be previously undescribed fungi. Different sections of the core were characterized by high sequence diversity, richness and moderate ecological dominance indices. The assigned diversity was dominated by cosmopolitan cold-adapted fungi, including known saprotrophic, plant and animal pathogenic and symbiotic taxa. Despite the overall dominance of Ascomycota and Basidiomycota and psychrophilic Mortierellomycota, members of the cryptic phyla Rozellomycota and Chytridiomycota were also detected in abundance. As Boeckella Lake may cease to exist in approaching decades due the effects of local climatic changes, it also an important location for the study of the impacts of these changes on Antarctic microbial diversity.

Indexed as

Climate ChangeLakesAnimalsAntarctic RegionsBaysBiodiversityFungiAntarcticaEcologyExtremophileFungiTaxonomy

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.