Evidence map›Paper›PMID 35499596›Full record

ArticleMarine biotechnology (New York, N.Y.)2022

Shell Matrix Protein N38 of Pinctada fucata, Inducing Vaterite Formation, Extends the DING Protein to the Mollusca World.

Xin Zhang, Zehui Yin, Zhuojun Ma, Jian Liang, Zhen Zhang, Liping Yao, Xia Chen, Xiaojun Liu, Rongqing Zhang

Abstract read
PubMed Publisher
In one paragraph

Article in Marine biotechnology (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. The First High-Quality Genome Assembly of Freshwater Pearl MusselInternational journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Xin ZhangKey Laboratory of Freshwater Aquatic Genetic Resources, Shanghai Ocean University, Ministry of Agriculture, Shanghai, 201306, China.
Zehui YinKey Laboratory of Freshwater Aquatic Genetic Resources, Shanghai Ocean University, Ministry of Agriculture, Shanghai, 201306, China.
Zhuojun MaChinese Academy of Fishery Sciences, Beijing, 100141, China.
Jian LiangState Key Laboratory of Plateau Ecology and Agriculture, Qinghai University, Xining, 810016, China.
Zhen ZhangDepartment of Biotechnology and Biomedicine, Yangtze Delta Region Institute of Tsinghua University, Zhejiang, 314000, China.
Liping YaoDepartment of Biotechnology and Biomedicine, Yangtze Delta Region Institute of Tsinghua University, Zhejiang, 314000, China.
Xia ChenDepartment of Biotechnology and Biomedicine, Yangtze Delta Region Institute of Tsinghua University, Zhejiang, 314000, China.
Xiaojun LiuDepartment of Biotechnology and Biomedicine, Yangtze Delta Region Institute of Tsinghua University, Zhejiang, 314000, China. txliuxj@vip.163.com.ORCID http://orcid.org/0000-0002-0332-2940
Rongqing ZhangProtein Science laboratory of the Ministry of Education, Tsinghua University, Beijing, 100084, China. rqzhang@mail.tsinghua.edu.cn.
Tsinghua University · CNShanghai Ocean University · CNChinese Academy of Fishery Sciences · CNQinghai University · CNYangtze River Delta Physics Research Center (China) · CN

Funding

the National Key R &D Program of China 2018YFC0310600the National Natural Science Foundation of China 32072975
6 · The paper itself

Abstract

In the animal kingdom, DING proteins were only found in Chordata and Aschelminthes. At present study, a potential DING protein, matrix protein N38, was isolated and purified from the shell of Pinctada fucata. Tandem mass spectrometry analysis revealed that 14 peptide segments matched between N38 and human phosphate-binding protein (HPBP). HPBP belongs to the DING protein family and has a "DINGGG-" sequence, which is considered a "signature" of HPBP. In this study, the mass spectrometry analysis results showed that N38 had a "DIDGGG-" sequence; this structure is a mutation from the "DINGGG-" structure, which is a distinctive feature of the DING protein family. The role of N38 during calcium carbonate formation was explored through the in vitro crystallization experiment. The results of scanning electron microscopy and Raman spectrum analysis indicated that N38 induced vaterite formation. These findings revealed that N38 might regulate and participate in the precise control of the crystal growth of the shell, providing new clues for biomineralization mechanisms in P. fucata and DING protein family studies. In addition, this study helped extend the research of DING protein to the Mollusca world.

Indexed as

PinctadaAnimalsAnimal ShellsBiomineralizationCalcium CarbonateProteinsCalcium CarbonateProteinsBiomineralizationDING proteinShell matrix proteinVaterite formation

Identifiers

PMID35499596
OpenAlexW4225273870

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.