Evidence map›Paper›PMID 35499308›Full record

ArticlemBio2022

Genomic and Phenotypic Characterization of Clostridium botulinum Isolates from an Infant Botulism Case Suggests Adaptation Signatures to the Gut.

François P Douillard, Yağmur Derman, Cédric Woudstra, Katja Selby, Tommi Mäklin, Martin B Dorner, Harri Saxén, Brigitte G Dorner, Hannu Korkeala, Miia Lindström

Open access · goldAbstract readCase Reports
In one paragraph

Article in mBio, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Conflicting Clinical Presentation of Infection withJournal of pediatrics. Clinical practice · 2025
    Article
  4. Whole genome sequencing of neurotoxin-producingFrontiers in public health · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Detection ofFoods (Basel, Switzerland) · 2023
    Article
  9. Frontiers in microbiology · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

François P DouillardDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinkigrid.7737.4, Helsinki, Finland.
Yağmur DermanDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinkigrid.7737.4, Helsinki, Finland.
Cédric WoudstraDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinkigrid.7737.4, Helsinki, Finland.
Katja SelbyDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinkigrid.7737.4, Helsinki, Finland.
Tommi MäklinHelsinki Institute for Information Technology HIIT, Department of Mathematics and Statistics, University of Helsinkigrid.7737.4, Helsinki, Finland.
Martin B DornerBiological Toxins, Centre for Biological Threats and Special Pathogens, Robert Koch Institute, Berlin, Germany.
Harri SaxénNew Children's Hospital, Pediatric Research Center, University of Helsinkigrid.7737.4 and Helsinki University Hospital, Helsinki, Finland.
Brigitte G DornerBiological Toxins, Centre for Biological Threats and Special Pathogens, Robert Koch Institute, Berlin, Germany.
Hannu KorkealaDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinkigrid.7737.4, Helsinki, Finland.
Miia LindströmDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinkigrid.7737.4, Helsinki, Finland.ORCID 0000-0002-0421-7595
University of Helsinki · FIRobert Koch Institute · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In early life, the immature human gut microbiota is prone to colonization by pathogens that are usually outcompeted by mature microbiota in the adult gut. Colonization and neurotoxin production by a vegetative Clostridium botulinum culture in the gut of an infant can lead to flaccid paralysis, resulting in a clinical outcome known as infant botulism, a potentially life-threatening condition. Beside host factors, little is known of the ecology, colonization, and adaptation of C. botulinum to the gut environment. In our previous report, an infant with intestinal botulism was shown to be colonized by neurotoxigenic C. botulinum culture for 7 months. In an effort to gain ecological and evolutionary insights into this unusually long gut colonization by C. botulinum, we analyzed and compared the genomes of C. botulinum isolates recovered from the infant feces during the course of intoxication and isolates from the infant household dust. A number of observed mutations and genomic alterations pinpointed at phenotypic traits that may have promoted colonization and adaptation to the gut environment and to the host. These traits include motility, quorum-sensing, sporulation, and carbohydrate metabolism. We provide novel perspectives and suggest a tentative model of the pathogenesis of C. botulinum in infant botulism.

Indexed as

BotulismClostridium botulinumGastrointestinal MicrobiomeFecesGenomicsHumansInfantbotulismClostridium botulinumecologygenomics

Identifiers

PMID35499308
PMCPMC9239077
OpenAlexW4225282379

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.