Evidence map›Paper›PMID 35499085›Full record

ArticleThe Journal of clinical investigation2022

Loss of the collagen IV modifier prolyl 3-hydroxylase 2 causes thin basement membrane nephropathy.

Hande Aypek, Christoph Krisp, Shun Lu, Shuya Liu, Dominik Kylies, Oliver Kretz, Guochao Wu, Manuela Moritz, Kerstin Amann, Kerstin Benz and 12 more

Open access · goldAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
4.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Evidence for the major role of PH4⍺EFB in the prolyl 4-hydroxylation of Drosophila collagen IV.Matrix biology : journal of the International Society for Matrix Biology · 2025
    Article
  4. Collagen IV in Gould syndrome and Alport syndrome.Nature reviews. Nephrology · 2025
    Review
  5. Collagen IV biosynthesis: Intracellular choreography of post-translational modifications.Matrix biology : journal of the International Society for Matrix Biology · 2025
    Review
  6. The Life of a Kidney Podocyte.Acta physiologica (Oxford, England) · 2025
    Review
  7. The life cycle of type IV collagen.Matrix biology : journal of the International Society for Matrix Biology · 2025
    Review
  8. Review
  9. Article
  10. Article
  11. Early Diagnosis and Treatment of Kidney Injury: A Focus on Urine Protein.International journal of molecular sciences · 2024
    Review
  12. Article
  13. Article
  14. Article
  15. Collagen IV of basement membranes: II. Emergence of collagen IVThe Journal of biological chemistry · 2023
    Article
  16. Review
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

22 authors at 7 institutions in 4 countries.

Hande AypekIII. Department of Medicine and.
Christoph KrispInstitute of Clinical Chemistry and Laboratory Medicine, Mass Spectrometric Proteomics Group, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Shun LuIII. Department of Medicine and.
Shuya LiuIII. Department of Medicine and.
Dominik KyliesIII. Department of Medicine and.
Oliver KretzIII. Department of Medicine and.
Guochao WuIII. Department of Medicine and.
Manuela MoritzInstitute of Clinical Chemistry and Laboratory Medicine, Mass Spectrometric Proteomics Group, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Kerstin AmannDepartment of Nephropathology, Institute of Pathology and.
Kerstin BenzDepartment of Pediatrics, University of Erlangen, Erlangen, Germany.
Ping TongDepartment of Ophthalmology, The Second Xiangya Hospital and.
Zheng-Mao HuCenter for Medical Genetics, School of Life Sciences, Central South University, Changsha, Hunan, China.
Sulaiman M AlsulaimanVitreoretinal Division, King Khaled Eye Specialist Hospital, Riyadh, Saudi Arabia.
Arif O KhanEye Institute, Cleveland Clinic Abu Dhabi, Abu Dhabi, United Arab Emirates.
Maik GrohmannMedizinische Genetik Mainz, Limbach Genetics, Mainz, Germany.
Timo WagnerMedizinische Genetik Mainz, Limbach Genetics, Mainz, Germany.
Janina Müller-DeileDepartment of Nephrology, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
Hartmut SchlüterInstitute of Clinical Chemistry and Laboratory Medicine, Mass Spectrometric Proteomics Group, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.
Victor G PuellesIII. Department of Medicine and.
Carsten BergmannMedizinische Genetik Mainz, Limbach Genetics, Mainz, Germany.
Tobias B HuberIII. Department of Medicine and.
Florian GrahammerIII. Department of Medicine and.
Universität Hamburg · DECentral South University · CNFriedrich-Alexander-Universität Erlangen-Nürnberg · DEArkana Laboratories · USCleveland Clinic Lerner College of Medicine · USKing Khaled Eye Specialist Hospital · SAUniversity of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The glomerular filtration barrier (GFB) produces primary urine and is composed of a fenestrated endothelium, a glomerular basement membrane (GBM), podocytes, and a slit diaphragm. Impairment of the GFB leads to albuminuria and microhematuria. The GBM is generated via secreted proteins from both endothelial cells and podocytes and is supposed to majorly contribute to filtration selectivity. While genetic mutations or variations of GBM components have been recently proposed to be a common cause of glomerular diseases, pathways modifying and stabilizing the GBM remain incompletely understood. Here, we identified prolyl 3-hydroxylase 2 (P3H2) as a regulator of the GBM in an a cohort of patients with albuminuria. P3H2 hydroxylates the 3' of prolines in collagen IV subchains in the endoplasmic reticulum. Characterization of a P3h2ΔPod mouse line revealed that the absence of P3H2 protein in podocytes induced a thin basement membrane nephropathy (TBMN) phenotype with a thinner GBM than that in WT mice and the development of microhematuria and microalbuminuria over time. Mechanistically, differential quantitative proteomics of the GBM identified a significant decrease in the abundance of collagen IV subchains and their interaction partners in P3h2ΔPod mice. To our knowledge, P3H2 protein is the first identified GBM modifier, and loss or mutation of P3H2 causes TBMN and focal segmental glomerulosclerosis in mice and humans.

Indexed as

AlbuminuriaEndothelial CellsAnimalsCollagen Type IVFemaleGlomerular Basement MembraneHematuriaHumansMaleMiceProcollagen-Proline DioxygenaseCollagen Type IVProcollagen-Proline Dioxygenaseproline, 2-oxoglutarate 3-dioxygenaseChronic kidney diseaseCollagensMonogenic diseasesNephrology

Identifiers

PMID35499085
PMCPMC9057608
OpenAlexW4225246637

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.