Evidence map›Paper›PMID 35498413›Full record

ArticleFrontiers in endocrinology2022

Pancreas Whole Tissue Transcriptomics Highlights the Role of the Exocrine Pancreas in Patients With Recently Diagnosed Type 1 Diabetes.

Tommi Välikangas, Niina Lietzén, Maria K Jaakkola, Lars Krogvold, Morten C Eike, Henna Kallionpää, Soile Tuomela, Clayton Mathews, Ivan C Gerling, Sami Oikarinen and 4 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in endocrinology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 9 institutions in 3 countries.

Tommi VälikangasTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Niina LietzénTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Maria K JaakkolaTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Lars KrogvoldPediatric Department, Oslo University Hospital, Oslo, Norway.
Morten C EikeDepartment of Medical Genetics, Oslo University Hospital, Oslo, Norway.
Henna KallionpääTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Soile TuomelaTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Clayton MathewsDepartment of Pathology, University of Florida, Gainesville, FL, United States.
Ivan C GerlingDepartment of Medicine, University of Tennessee Health Science Center, Memphis, TN, United States.
Sami OikarinenFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.
Heikki HyötyFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.
Knut Dahl-JorgensenPediatric Department, Oslo University Hospital, Oslo, Norway.
Laura L EloTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Riitta LahesmaaTurku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.
Turku Centre for Computer Science · FIÅbo Akademi University · FIUniversity of Oslo · NOUniversity of Turku · FIFimlab (Finland) · FIOslo University Hospital · NOTampere University · FIUniversity of Florida · USUniversity of Tennessee Health Science Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although type 1 diabetes (T1D) is primarily a disease of the pancreatic beta-cells, understanding of the disease-associated alterations in the whole pancreas could be important for the improved treatment or the prevention of the disease. We have characterized the whole-pancreas gene expression of patients with recently diagnosed T1D from the Diabetes Virus Detection (DiViD) study and non-diabetic controls. Furthermore, another parallel dataset of the whole pancreas and an additional dataset from the laser-captured pancreatic islets of the DiViD patients and non-diabetic organ donors were analyzed together with the original dataset to confirm the results and to get further insights into the potential disease-associated differences between the exocrine and the endocrine pancreas. First, higher expression of the core acinar cell genes, encoding for digestive enzymes, was detected in the whole pancreas of the DiViD patients when compared to non-diabetic controls. Second, In the pancreatic islets, upregulation of immune and inflammation related genes was observed in the DiViD patients when compared to non-diabetic controls, in line with earlier publications, while an opposite trend was observed for several immune and inflammation related genes at the whole pancreas tissue level. Third, strong downregulation of the regenerating gene family (

Indexed as

Diabetes Mellitus, Type 1Pancreas, ExocrineAntiviral AgentsHumansInflammationPancreasTranscriptomeAntiviral AgentsDiViDexocrine pancreasgene expressionpancreaspancreatic islettranscriptomicstype 1 diabetes

Identifiers

PMID35498413
PMCPMC9044038
OpenAlexW4223912940

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.