Evidence map›Paper›PMID 35495191›Full record

ArticleApplications in plant sciences

Integrating tissue-direct PCR into genetic identification: An upgraded molecular ecology approach to survey fern gametophytes in the field.

Yi-Hsuan Wu, Ya-Ting Ke, Yuan-Yao Chan, Goang-Jiun Wang, Li-Yaung Kuo

Open access · goldAbstract read
In one paragraph

Article in Applications in plant sciences. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Systematics and Plastome Evolution in Schizaeaceae.Frontiers in plant science · 2022
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  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Yi-Hsuan WuInstitute of Molecular and Cellular Biology National Tsing Hua University Hsinchu City Taiwan.ORCID 0000-0002-1671-2489
Ya-Ting KeInstitute of Molecular and Cellular Biology National Tsing Hua University Hsinchu City Taiwan.
Yuan-Yao ChanCollege of Biological Science and Technology National Yang Ming Chiao Tung University Hsinchu City Taiwan.
Goang-Jiun WangDepartment of Life Science, College of Life Science National Taiwan University Taipei City Taiwan.
Li-Yaung KuoInstitute of Molecular and Cellular Biology National Tsing Hua University Hsinchu City Taiwan.ORCID 0000-0002-3388-3757
National Tsing Hua University · TWNational Taiwan University · TWNational Yang Ming Chiao Tung University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Premise: The gametophytes of different fern species collected in the field can be difficult to distinguish because of their morphological similarities. Nonetheless, emerging molecular ecology techniques are starting to be used to tackle such limitations. Here, using case studies and a detailed protocol, we demonstrate a convenient methodology, tissue-direct PCR (TD-PCR), that foregoes a traditional DNA extraction and facilitates the identification of fern gametophytes, as well as enabling the elucidation of their natural distribution. Methods: Based on updated plastome information, we designed a universal primer set targeting the Results: Compared with approaches requiring DNA extraction, the use of TD-PCR with either universal or taxon-specific primers could save significant time, money, labor, and research materials in the genetic identification of fern gametophytes. Discussion: The use of modern genetic tools can aid in the identification of fern gametophytes. An updated TD-PCR strategy not only facilitates the DNA-based identification of gametophytes, but also promotes new avenues of research for investigating these plants in the field.

Indexed as

DNA‐based identificationfern gametophyteindependent gametophytesLomariopsismolecular ecologytissue‐direct PCRtree fern specialistVaginularia

Identifiers

PMID35495191
PMCPMC9039786
OpenAlexW4221073054

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.