Evidence map›Paper›PMID 35494791›Full record

ArticlePeerJ. Computer science2022

DBFU-Net: Double branch fusion U-Net with hard example weighting train strategy to segment retinal vessel.

Jianping Huang, Zefang Lin, Yingyin Chen, Xiao Zhang, Wei Zhao, Jie Zhang, Yong Li, Xu He, Meixiao Zhan, Ligong Lu and 2 more

Abstract read
In one paragraph

Article in PeerJ. Computer science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Jianping Huang *Zhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Zhuhai Interventional Medical Center, Zhuhai Precision Medical Center, Zhuhai, China.
Zefang Lin *Zhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Zhuhai Interventional Medical Center, Zhuhai Precision Medical Center, Zhuhai, China.
Yingyin ChenZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Zhuhai Interventional Medical Center, Zhuhai Precision Medical Center, Zhuhai, China.
Xiao ZhangZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Zhuhai Interventional Medical Center, Zhuhai Precision Medical Center, Zhuhai, China.
Wei ZhaoZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Zhuhai Interventional Medical Center, Zhuhai Precision Medical Center, Zhuhai, China.
Jie ZhangZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Department of Nuclear Medicine, Zhuhai, China.
Yong LiZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Zhuhai Interventional Medical Center, Zhuhai Precision Medical Center, Zhuhai, China.
Xu HeZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Zhuhai Interventional Medical Center, Zhuhai Precision Medical Center, Zhuhai, China.
Meixiao ZhanZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Zhuhai Interventional Medical Center, Zhuhai Precision Medical Center, Zhuhai, China.
Ligong LuZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Zhuhai Interventional Medical Center, Zhuhai Precision Medical Center, Zhuhai, China.
Xiaofei JiangZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Department of cardiology, Zhuhai, China.
Yongjun PengZhuhai People's Hospital, Zhuhai Hospital Affiliated with Jinan University, Jinan University, Department of Nuclear Medicine, Zhuhai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Many fundus imaging modalities measure ocular changes. Automatic retinal vessel segmentation (RVS) is a significant fundus image-based method for the diagnosis of ophthalmologic diseases. However, precise vessel segmentation is a challenging task when detecting micro-changes in fundus images, Methods: In this paper, we will introduce a novel double branch fusion U-Net model that allows one of the branches to be trained by a weighting scheme that emphasizes harder examples to improve the overall segmentation performance. A new mask, we call a hard example mask, is needed for those examples that include a weighting strategy that is different from other methods. The method we propose extracts the hard example mask by morphology, meaning that the hard example mask does not need any rough segmentation model. To alleviate overfitting, we propose a random channel attention mechanism that is better than the drop-out method or the L2-regularization method in RVS. Results: We have verified the proposed approach on the DRIVE, STARE and CHASE datasets to quantify the performance metrics. Compared to other existing approaches, using those dataset platforms, the proposed approach has competitive performance metrics. (DRIVE: F1-Score = 0.8289, G-Mean = 0.8995, AUC = 0.9811; STARE: F1-Score = 0.8501, G-Mean = 0.9198, AUC = 0.9892; CHASE: F1-Score = 0.8375, G-Mean = 0.9138, AUC = 0.9879). Discussion: The segmentation results showed that DBFU-Net with RCA achieves competitive performance in three RVS datasets. Additionally, the proposed morphological-based extraction method for hard examples can reduce the computational cost. Finally, the random channel attention mechanism proposed in this paper has proven to be more effective than other regularization methods in the RVS task.

Indexed as

Deep learningFundus imageHard examplesRandom channel attention mechanismVessel segmentation

Identifiers

PMID35494791
PMCPMC9044242

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.