Evidence map›Paper›PMID 35493317›Full record

ArticleFrontiers in applied mathematics and statistics2021

Mathematical modeling of zebrafish social behavior in response to acute caffeine administration.

Mohammad Tuqan, Maurizio Porfiri

Open access · goldAbstract read
In one paragraph

Article in Frontiers in applied mathematics and statistics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Mohammad TuqanDepartment of Mechanical and Aerospace Engineering, New York University, Tandon School of Engineering, New York, USA.
Maurizio PorfiriDepartment of Mechanical and Aerospace Engineering, New York University, Tandon School of Engineering, New York, USA.
New York University · US

Funding

Robotics may help unravel the biological determinants of substance use disorders: studies in zebrafishR21DA042558 · NIDA · NEW YORK UNIVERSITY · PI PORFIRI, MAURIZIO · 2017 to 2018
$346k
NIDA NIH HHS R21 DA042558
6 · The paper itself

Abstract

Zebrafish is a model organism that is receiving considerable attention in preclinical research. Particularly important is the use of zebrafish in behavioral pharmacology, where a number of high-throughput experimental paradigms have been proposed to quantify the effect of psychoactive substances consequences on individual and social behavior. In an effort to assist experimental research and improve animal welfare, we propose a mathematical model for the social behavior of groups of zebrafish swimming in a shallow water tank in response to the administration of psychoactive compounds to select individuals. We specialize the mathematical model to caffeine, a popular anxiogenic compound. Each fish is assigned to a Markov chain that describes transitions between freezing and swimming. When swimming, zebrafish locomotion is modeled as a pair of coupled stochastic differential equations, describing the time evolution of the turn-rate and speed in response to caffeine administration. Comparison with experimental results demonstrates the accuracy of the model and its potential use in the design of

Indexed as

Anxietycollective behaviorDanio rerioin-silicopharmacologysocial interactionstochastic differential equations

Identifiers

PMID35493317
PMCPMC9053518
OpenAlexW3205518364

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.