Evidence map›Paper›PMID 35492989›Full record

ArticleRSC advances2020

A molecular simulation approach towards the development of universal nanocarriers by studying the pH- and electrostatic-driven changes in the dynamic structure of albumin.

Amit Kumar Srivastav, Sanjeev K Gupta, Umesh Kumar

Open access · goldAbstract read
In one paragraph

Article in RSC advances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Amit Kumar SrivastavSchool of Nano Sciences, Central University of Gujarat Gandhinagar 382030 India umesh.kumar@cug.ac.in.
Sanjeev K GuptaComputational Materials and Nanoscience Group, Department of Physics, St. Xavier's College Ahmedabad 380009 India sanjeev.gupta@sxca.edu.in.ORCID https://orcid.org/0000-0002-3060-2104
Umesh KumarSchool of Nano Sciences, Central University of Gujarat Gandhinagar 382030 India umesh.kumar@cug.ac.in.ORCID https://orcid.org/0000-0003-1842-0225
Nano Hydrophobics (United States) · USSt. Xavier's College (Autonomous)

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To explore the intramolecular interactions of protein, and its folding and unfolding mechanisms, we performed a simulation-based comparative study on albumin at different ionic strengths and pH. In this study, we performed molecular dynamics (MD) simulation for bovine serum albumin (BSA) at five different concentrations of NaCl (10, 20, 30, 40 and 50 mM), and five different pH values (2.0, 3.5, 4.3, 7.4, and 9.0). Herein, our aim was to unravel the effects of both pH and ionic strength on the conformations of the serum albumin structure. Our results indicate the effects of physicochemical factors in promoting conformational changes in the albumin structure, unlocking the hydrophobic sequences for hydrophobic drug binding. The BSA structure showed similarity to its native state in the pH range of 4.5 to 7.4 and at various ionic concentrations of NaCl. In the pH range of 3.5 to 4.5, the BSA structure showed denaturation in a controlled manner, which caused significant conformational changes in the molecular position of its hydrophobic amino acid residues. The resultant 3D structure gives insight into the amino acid trajectories. High denaturation and unstable behavior in the structural and conformational changes of the protein structure were observed at pH 2.0 and pH 9.0. We believe that these results and conditions will be helpful in the development of protein-based universal nanocarriers for the encapsulation of both hydrophilic and hydrophobic drugs.

Identifiers

PMID35492989
PMCPMC9051469
OpenAlexW3014410464

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.