Evidence map›Paper›PMID 35490230›Full record

ArticleBMC genomics2022

Anaplasma phagocytophilum in Marmota himalayana.

Ran Duan, Dongyue Lv, Rong Fan, Guoming Fu, Hui Mu, Jinxiao Xi, Xinmin Lu, Hua Chun, Jun Hua, Zhaokai He and 6 more

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.0field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Symbiosis of a lytic bacteriophage andApplied and environmental microbiology · 2024
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  3. Review
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  7. Identification of NovelChina CDC weekly · 2023
    Article
  8. Species-level microbiota of ticks and fleas fromFrontiers in microbiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Ran Duan *State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Dongyue Lv *State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Rong Fan *State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Guoming Fu *Subei Mongolian Autonomous County Center for Disease Control and Prevention, Jiuquan, China.
Hui MuState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Jinxiao XiGansu Provincial Center for Disease Control and Prevention, Lanzhou, China.
Xinmin LuAkesai Kazakh Autonomous County Center for Disease Control and Prevention, Jiuquan, China.
Hua ChunSubei Mongolian Autonomous County Center for Disease Control and Prevention, Jiuquan, China.
Jun HuaSubei Mongolian Autonomous County Center for Disease Control and Prevention, Jiuquan, China.
Zhaokai HeState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Shuai QinState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Yanyan HuangSubei Mongolian Autonomous County Center for Disease Control and Prevention, Jiuquan, China.
Meng XiaoState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Jinchuan YangState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Huaiqi JingState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China.
Xin WangState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China. wangxin@icdc.cn.
National Institute for Communicable Disease Control and Prevention · CNInner Mongolia Comprehensive Disease Prevention and Control Center · CNGansu Provincial Center for Disease Control and Prevention · CN

Funding

National Science and Technology Major Project 2018ZX10713-001-002National Science and Technology Major Project 2018ZX10713-003-002
6 · The paper itself

Abstract

backgroundHuman granulocytic anaplasmosis is a tick-borne zoonotic disease caused by Anaplasma phagocytophilum. Coinfections with A. phagocytophilum and other tick-borne pathogens are reported frequently, whereas the relationship between A. phagocytophilum and flea-borne Yersnia pestis is rarely concerned.

resultsA. phagocytophilum and Yersnia pestis were discovered within a Marmota himalayana found dead in the environment, as determined by 16S ribosomal rRNA sequencing. Comparative genomic analyses of marmot-derived A. phagocytophilum isolate demonstrated its similarities and a geographic isolation from other global strains. The 16S rRNA gene and GroEL amino acid sequence identity rates between marmot-derived A. phagocytophilum (JAHLEX000000000) and reference strain HZ (CP000235.1) are 99.73% (1490/1494) and 99.82% (549/550), respectively. 16S rRNA and groESL gene screenings show that A. phagocytophilum is widely distributed in marmots; the bacterium was more common in marmots found dead (24.59%, 15/61) than in captured marmots (19.21%, 29/151). We found a higher Y. pestis isolation rate in dead marmots harboring A. phagocytophilum than in those without it (

conclusionsIn this study, A. phagocytophilum was identified for the first time in Marmota himalayana, a predominant Yersinia pestis host. Our results provide initial evidence for M. himalayana being a reservoir for A. phagocytophilum; moreover, we found with the presence of A. phagocytophilum, marmots may be more vulnerable to plague. Humans are at risk for co-infection with both pathogens by exposure to such marmots.

Indexed as

Anaplasma phagocytophilumAnaplasmosisTicksAnimalsMarmotaMiceRNA, Ribosomal, 16SRNA, Ribosomal, 16SAnaplasma phagocytophilumAnaplasmosisCoinfectionMarmota himalayanaPlagueYersinia pestis

Identifiers

PMID35490230
PMCPMC9055747
OpenAlexW4225156790

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.