Evidence map›Paper›PMID 35490048›Full record

ArticleUrologic oncology2022

A multidisciplinary approach to optimize primary prostate cancer biobanking.

Peter Y Cai, Muhammad Asad, Michael A Augello, Laura Martin, Christopher Louie, Spyridon P Basourakos, Christopher D Gaffney, Jonathan Shoag, Jiangling Jenny Tu, Francesca Khani and 5 more

Abstract read
In one paragraph

Article in Urologic oncology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Peter Y CaiDepartment of Urology, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY.
Muhammad AsadDepartment of Pathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY.
Michael A AugelloMeyer Cancer Center, Weill Cornell Medicine, New York, NY.
Laura MartinEnglander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY.
Christopher LouieDepartment of Pathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY.
Spyridon P BasourakosDepartment of Urology, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY.
Christopher D GaffneyDepartment of Urology, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY.
Jonathan ShoagDepartment of Urology, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY; University Hospitals Cleveland Medical Center, Case Western Reserve University School of Medicine, Cleveland, OH.
Jiangling Jenny TuDepartment of Pathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY.
Francesca KhaniDepartment of Urology, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY; Department of Pathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY; Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY.
Juan Miguel MosqueraDepartment of Pathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY; Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY.
Massimo LodaDepartment of Pathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY; Meyer Cancer Center, Weill Cornell Medicine, New York, NY.
Douglas S ScherrDepartment of Urology, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY.
Christopher E BarbieriDepartment of Urology, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY; Meyer Cancer Center, Weill Cornell Medicine, New York, NY. Electronic address: chb9074@med.cornell.edu.
Brian D RobinsonDepartment of Urology, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY; Department of Pathology and Laboratory Medicine, New York Presbyterian Hospital, Weill Cornell Medicine, New York, NY; Meyer Cancer Center, Weill Cornell Medicine, New York, NY; Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY. Electronic address: brr2006@med.cornell.edu.

Funding

Weill Cornell Medicine (WCM) SPORE in Prostate CancerP50CA211024 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI GUDAS, LORRAINE J · 2017 to 2021
$10.9M
Collaborative genomic alterations and transcriptional control in prostate cancerR01CA233650 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI BARBIERI, CHRISTOPHER E · 2019 to 2023
$2.8M
NCI NIH HHS P50 CA211024NCI NIH HHS R01 CA233650
6 · The paper itself

Abstract

purposeBiobanking tissue of high quality and fidelity is imperative for cancer genomics research. Since it is a challenging process, we sought to develop a protocol that improves the fidelity and quantity of biobanked primary prostate cancer (CaP) tissue. MATERIALS AND

methodsWe conducted a pilot study evaluating pathologic concordance of biobanked tissue and the radical prostatectomy specimen using either standard protocol (SP) vs. next-generation protocol (NGP).

resultsThere were no significant differences in clinical and pathologic characteristics (age, BMI, preoperative PSA, prostate weight, race, final prostatectomy Gleason score, or pathologic tumor and nodal stages) between the two protocol arms. Utilization of the NGP compared to the standard protocol resulted in a significantly higher rate of pathologic concordance between the biobanked and RP specimens (61.8% vs. 37.9%, P = 0.0231) as well as a nearly two-fold increase in the amount of biobanked tumor tissue (330 mm

conclusionsOur study validates the NGP as a multidisciplinary approach for improving the fidelity and amount of biobanked primary CaP tissue for future studies. Given the challenges to banking tissue from primary CaP as tumors are often difficult to visualize grossly and are frequently multifocal, optimizing the fidelity and volume of biobanked tissue is an important step forward to improve the generalizability of genomic data as we move towards precision medicine.

Indexed as

Prostatic NeoplasmsBiological Specimen BanksHumansMaleNeoplasm StagingPilot ProjectsProstateProstatectomyProstate-Specific AntigenProstate-Specific AntigenBiobankFresh frozen tissueGleason scoreGross pathologyMolecular subtypePathologyProstate cancerRadical prostatectomyTCGATumor volume

Identifiers

PMID35490048
PMCPMC9117451

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.