Evidence map›Paper›PMID 35489589›Full record

ArticleThe ocular surface2022

Immuno Tomography (IT) and Imaging Mass Cytometry (IMC) for constructing spatially resolved, multiplexed 3D IMC data sets.

Ladan Gheiratmand, Donald J Brown, Daaf Sandkuijl, Alexander Loboda, James V Jester

Open access · greenAbstract read
In one paragraph

Article in The ocular surface, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Ladan GheiratmandStandard BioTools Canada Inc. (formerly Fluidigm), 1380 Rodick Road, Suite 400, Markham, ON, Canada. Electronic address: ladan.gheiratmand@fluidigm.com.
Donald J BrownDepartment of Ophthalmology, University of California Irvine, Irvine, CA, USA.
Daaf SandkuijlStandard BioTools Canada Inc. (formerly Fluidigm), 1380 Rodick Road, Suite 400, Markham, ON, Canada.
Alexander LobodaStandard BioTools Canada Inc. (formerly Fluidigm), 1380 Rodick Road, Suite 400, Markham, ON, Canada.
James V JesterDepartment of Ophthalmology, University of California Irvine, Irvine, CA, USA.
Fluidigm (Canada) · CAUniversity of California, Irvine · US

Funding

Age-Related Meibomian Gland DysfunctionR01EY021510 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI James V Jester · 2011 to 2026
$4.8M
NEI NIH HHS R01 EY021510
6 · The paper itself

Abstract

purposeWe have previously used Immuno Tomography (IT) to identify label-retaining stem cell populations in the cornea and meibomian gland. While this method provides the unique ability to quantify stem cell populations comprised of 1-4 cells, the number of antigens that can be sequentially used to characterize these unique cells is limited by antigen stability after antibody stripping and re-probing. To address this deficiency, we have evaluated the capability of Imaging Mass Cytometry™ (IMC™) to generate multiplexed images using metal-conjugated antibodies to label IT plastic sections and generate 3-dimensional IMC data sets (3D IMC).

methodsK5-H2B-GFP mice, 56 days after doxycycline chase, were sacrificed and eyelid tissue processed for IT. A total of 400 serial, plastic sections, 2 μm thick, were then probed using metal-tagged antibodies specific for sox 9, collagen type I, E-cadherin, Ki67, GFP, αSMA, vimentin, and DNA intercalator. Multiplexed images were then generated using an Imaging Mass Cytometry system (Fluidigm®), and 3D reconstructions were assembled.

resultsAll 8 metal-labeled tags were detected and their images were successfully assembled into 3D IMC data sets. GFP-labeled nuclei were identified within the meibomian glands in comparable numbers to those previously reported for slow-cycling meibomian gland stem cells.

conclusionsThese findings demonstrate that IMC can be used on plastic sections to generate multiplexed, 3D data sets that can be reconstructed to show the spatial localization of meibomian gland stem cells. We propose that 3D IMC might prove valuable in more fully characterizing stem cell populations in different tissues.

Indexed as

Imaging, Three-DimensionalMeibomian GlandsAnimalsImage CytometryMicePlasticsStem CellsPlastics3D imagingImaging mass cytometryImmuno tomographyMeibomian glandMetal-conjugated antibody

Identifiers

PMID35489589
PMCPMC10411503
OpenAlexW4224984636

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.