Evidence map›Paper›PMID 35488033›Full record

ArticleLaboratory investigation; a journal of technical methods and pathology2022

Complex genetic and histopathological study of 15 patient-derived xenografts of aggressive lymphomas.

Radek Jakša, Jana Karolová, Michael Svatoň, Dmitry Kazantsev, Martina Grajciarová, Eva Pokorná, Zbyněk Tonar, Magdalena Klánová, Lucie Winkowska, Diana Maláriková and 9 more

Open access · hybridAbstract read
In one paragraph

Article in Laboratory investigation; a journal of technical methods and pathology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 1 institution in 1 country.

Radek JakšaInstitute of Pathology, University General Hospital Prague and First Faculty of Medicine, Charles University, Prague, Czech Republic.
Jana KarolováInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Michael SvatoňCLIP- Childhood Leukaemia Investigation Prague, Department of Pediatric Haematology and Oncology, Second Faculty of Medicine, Charles University and University Hospital Motol, Prague, Czech Republic.ORCID 0000-0003-2966-3687
Dmitry KazantsevInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Martina GrajciarováDepartment of Histology and Embryology and Biomedical Center, Faculty of Medicine in Pilsen, Charles University, Pilsen, Czech Republic.
Eva PokornáInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Zbyněk TonarDepartment of Histology and Embryology and Biomedical Center, Faculty of Medicine in Pilsen, Charles University, Pilsen, Czech Republic.ORCID 0000-0002-7200-9894
Magdalena KlánováInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Lucie WinkowskaCLIP- Childhood Leukaemia Investigation Prague, Department of Pediatric Haematology and Oncology, Second Faculty of Medicine, Charles University and University Hospital Motol, Prague, Czech Republic.
Diana MalárikováInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Petra VočkováInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Kristina ForsterováFirst Department of Medicine- Hematology, University General Hospital Prague and First Faculty of Medicine, Charles University, Prague, Czech Republic.
Nicol RenešováInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Alexandra DolníkováInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Kristýna NožičkováInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic.
Pavel DundrInstitute of Pathology, University General Hospital Prague and First Faculty of Medicine, Charles University, Prague, Czech Republic.
Eva FroňkováCLIP- Childhood Leukaemia Investigation Prague, Department of Pediatric Haematology and Oncology, Second Faculty of Medicine, Charles University and University Hospital Motol, Prague, Czech Republic.
Marek TrněnýFirst Department of Medicine- Hematology, University General Hospital Prague and First Faculty of Medicine, Charles University, Prague, Czech Republic.ORCID 0000-0002-6952-6073
Pavel KlenerInstitute of Pathological Physiology, First Faculty of Medicine, Charles University, Prague, Czech Republic. pavel.klener2@lf1.cuni.cz.ORCID 0000-0001-7786-9378
Charles University · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Non-Hodgkin lymphomas (NHL) represent the most common hematologic malignancies. Patient-derived xenografts (PDXs) are used for various aspects of translational research including preclinical in vivo validation of experimental treatment approaches. While it was repeatedly demonstrated that PDXs keep majority of somatic mutations with the primary lymphoma samples, from which they were derived, the composition of PDX tumor microenvironment (TME) has not been extensively studied. We carried out a comparative genetic and histopathological study of 15 PDX models derived from patients with various types of NHL including diffuse large B-cell lymphoma (DLBCL; n = 7), Burkitt lymphoma (BL; n = 1), mantle cell lymphoma (MCL; n = 2), and peripheral T-cell lymphomas (PTCL; n = 5). Whole exome sequencing (WES) of the PDXs and primary lymphoma cells was implemented in 13 out of 15 cases with available DNA samples. Standard immunohistochemistry (IHC) was used to analyze the composition of PDX TME. WES data confirmed that PDXs maintained the genetic heterogeneity with the original primary lymphoma cells. In contrast, IHC analysis revealed the following recurrently observed alterations in the composition of PDX tumors: more blastoid lymphoma cell morphology, increased proliferation rate, lack of non-malignant cellular components including T cells and (human or murine) macrophages, and significantly lower intratumoral microvessel density and microvessel area composed of murine vessels. In addition, PDX tumors derived from T-NHL displayed additional differences compared to the primary lymphoma samples including markedly lower desmoplasia (i.e., the extent of both reticular and collagen fibrosis), loss of expression of cytotoxic granules (i.e., perforin, TIA, granzyme B), or loss of expression of T-cell specific antigens (i.e., CD3, CD4, CD8). Our data suggest that despite keeping the same genetic profiles, PDX models of aggressive NHL do not recapitulate the microenvironmental heterogeneity of the original lymphomas. These findings have implications on the relevance of PDX models in the context of preclinical research.

Indexed as

Antineoplastic AgentsLymphoma, Large B-Cell, DiffuseAdultAnimalsDisease Models, AnimalHeterograftsHumansMiceTumor MicroenvironmentAntineoplastic Agents

Identifiers

PMID35488033
PMCPMC9420679
OpenAlexW4225144394

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.