Evidence map›Paper›PMID 35487915›Full record

ArticleScientific reports2022

Novel prognostic biomarkers, METTL14 and YTHDF2, associated with RNA methylation in Ewing's sarcoma.

Jie Jiang, Qie Fan, Haishun Qu, Chong Liu, Tuo Liang, Liyi Chen, Shengsheng Huang, Xuhua Sun, Jiarui Chen, Tianyou Chen and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. CRISPR-Cas9 knockout screening identifies KIAA1429 as an essential gene in Ewing sarcoma.Journal of experimental & clinical cancer research : CR · 2023
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Jie Jiang *The First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Qie Fan *Department of Traditional Chinese Medicine, The People's Hospital of Guangxi Zhuang Autonmous Region, Nanning, 530000, People's Republic of China.
Haishun QuDepartment of Traditional Chinese Medicine, The People's Hospital of Guangxi Zhuang Autonmous Region, Nanning, 530000, People's Republic of China.
Chong LiuThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Tuo LiangThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Liyi ChenThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Shengsheng HuangThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Xuhua SunThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Jiarui ChenThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Tianyou ChenThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Hao LiThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Yuanlin YaoThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China.
Xinli ZhanThe First Clinical Affiliated Hospital of Guangxi Medical University, Nanning, 530021, People's Republic of China. zhanxinli_215@163.com.
First Affiliated Hospital of GuangXi Medical University · CNGuangxi Medical University · CNThe People's Hospital of Guangxi Zhuang Autonomous Region · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ewing's sarcoma has a poor prognosis and high metastasis rate; thus, it is critical to explore prognostic biomarkers of m6A-related genes. Two datasets were downloaded from the Gene Expression Omnibus database, m6A-related genes were extracted, and prognostic models were constructed using the least absolute shrinkage and selection operator and multivariate COX regression analyses. Immune cell composition and drug sensitivity analyses were performed, and our analysis was validated using laboratory methods of immunohistochemical specific staining and qRT-PCR. Ewing's sarcoma prognostic model demonstrated that the survival rate of cases in the high-risk group was much lower than that of the low-risk group. Naïve B cells, macrophages M0, macrophages M1, and resting mast cells are closely associated with Ewing's sarcoma. METTL14 and YTHDF2 are strongly associated with multiple drug sensitivity. Immunohistochemical specific staining revealed higher expression of both METTL14 and YTHDF2 in Ewing's sarcoma than in the paraneoplastic tissues. The results of qRT-PCR showed that METTL14 expression was significantly higher in both ES cell lines than in the control cell line. The prognostic model constructed using m6A-related genes METTL14 and TYHDF2, can be a potential prognostic biomarker for Ewing's sarcoma, with the survival rate of cases in the high-risk group being much lower than that of the low-risk group.

Indexed as

Neuroectodermal Tumors, Primitive, PeripheralSarcoma, EwingBiomarkersHumansMethylationMethyltransferasesPrognosisRNARNA-Binding ProteinsTranscription FactorsBiomarkersMethyltransferasesMETTL14 protein, humanRNARNA-Binding ProteinsTranscription FactorsYTHDF2 protein, human

Identifiers

PMID35487915
PMCPMC9054816
OpenAlexW4225124636

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.