Evidence map›Paper›PMID 35487909›Full record

ArticleScientific reports2022

Genome-wide association study identifies loci and candidate genes for grain micronutrients and quality traits in wheat (Triticum aestivum L.).

Nagenahalli Dharmegowda Rathan, Hari Krishna, Ranjith Kumar Ellur, Deepmala Sehgal, Velu Govindan, Arvind Kumar Ahlawat, Gopalareddy Krishnappa, Jai Prakash Jaiswal, Jang Bahadur Singh, Saiprasad Sv and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
15.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 78 citations in OpenAlex.

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  18. Stable pleotropic loci controlling the accumulation of multiple nutritional elements in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Nagenahalli Dharmegowda RathanIndian Agricultural Research Institute, New Delhi, India.
Hari KrishnaIndian Agricultural Research Institute, New Delhi, India.
Ranjith Kumar EllurIndian Agricultural Research Institute, New Delhi, India.
Deepmala SehgalInternational Maize and Wheat Improvement Center, Texcoco, Mexico.
Velu GovindanInternational Maize and Wheat Improvement Center, Texcoco, Mexico. velu@cgiar.org.
Arvind Kumar AhlawatIndian Agricultural Research Institute, New Delhi, India.
Gopalareddy KrishnappaIndian Institute of Wheat and Barley Research, Karnal, India.
Jai Prakash JaiswalGovind Ballabh Pant University of Agriculture and Technology, Pantnagar, India.
Jang Bahadur SinghIndian Agricultural Research Institute, Regional Station, Indore, India.
Saiprasad SvIndian Agricultural Research Institute, Regional Station, Indore, India.
Divya AmbatiIndian Agricultural Research Institute, Regional Station, Indore, India.
Sumit Kumar SinghIndian Agricultural Research Institute, New Delhi, India.
Kriti BajpaiIndian Agricultural Research Institute, New Delhi, India.
Anju Mahendru-SinghIndian Agricultural Research Institute, New Delhi, India. anju_mahendru@yahoo.co.in.
Indian Agricultural Research Institute · INCentro Internacional de Mejoramiento de Maíz Y Trigo · MXGovind Ballabh Pant University of Agriculture and Technology · INIndian Institute of Wheat and Barley Research · INInternational Maize and Wheat Improvement Center · KE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Malnutrition due to micronutrients and protein deficiency is recognized among the major global health issues. Genetic biofortification of wheat is a cost-effective and sustainable strategy to mitigate the global micronutrient and protein malnutrition. Genomic regions governing grain zinc concentration (GZnC), grain iron concentration (GFeC), grain protein content (GPC), test weight (TW), and thousand kernel weight (TKW) were investigated in a set of 184 diverse bread wheat genotypes through genome-wide association study (GWAS). The GWAS panel was genotyped using Breeders' 35 K Axiom Array and phenotyped in three different environments during 2019-2020. A total of 55 marker-trait associations (MTAs) were identified representing all three sub-genomes of wheat. The highest number of MTAs were identified for GPC (23), followed by TKW (15), TW (11), GFeC (4), and GZnC (2). Further, a stable SNP was identified for TKW, and also pleiotropic regions were identified for GPC and TKW. In silico analysis revealed important putative candidate genes underlying the identified genomic regions such as F-box-like domain superfamily, Zinc finger CCCH-type proteins, Serine-threonine/tyrosine-protein kinase, Histone deacetylase domain superfamily, and SANT/Myb domain superfamily proteins, etc. The identified novel MTAs will be validated to estimate their effects in different genetic backgrounds for subsequent use in marker-assisted selection.

Indexed as

MalnutritionTriticumEdible GrainGenome-Wide Association StudyMicronutrientsMicronutrients

Identifiers

PMID35487909
PMCPMC9054743
OpenAlexW4225155999

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.