Evidence map›Paper›PMID 35487642›Full record

ArticleBMJ case reports2022

RNA sequencing uncovers clinically actionable germline intronic

Kelly Fulk, Morgan Turner, Amanda Eppolito, Rebekah Krukenberg

Open access · greenAbstract readCase Reports
In one paragraph

Article in BMJ case reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 1 country.

Kelly FulkAmbry Genetics Corp, Aliso Viejo, California, USA kfulk@ambrygen.com.ORCID http://orcid.org/0000-0002-4517-9046
Morgan TurnerInova Primary Care, Falls Church, Virginia, USA.
Amanda EppolitoPiedmont Healthcare Inc, Atlanta, Georgia, USA.
Rebekah KrukenbergCommunity Health Network Inc, Indianapolis, Indiana, USA.
Ambry Genetics (United States) · USCommunity Health Network · USInova Health System · USPiedmont HealthCare · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite advances in genetic testing for Lynch syndrome, nearly one quarter of mismatch repair-deficient (MMRd) colorectal and endometrial cancers remain unexplained. When added to germline DNA testing, RNA sequencing can increase diagnostic yield, improve variant classification and reduce variants of uncertain significance. Here, we describe two cases where RNA sequencing uncovered likely pathogenic

Indexed as

Colorectal Neoplasms, Hereditary NonpolyposisFemaleGerm CellsHumansMutS Homolog 2 ProteinRNASequence Analysis, RNAMSH2 protein, humanMutS Homolog 2 ProteinRNAGenetic screening / counsellingOncology

Identifiers

PMID35487642
PMCPMC9058703
OpenAlexW4225130366

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.