Evidence map›Paper›PMID 35487288›Full record

ArticleGastroenterology2022

Toll-like Receptor 9 Pathway Mediates Schlafen

Lin Ding, Jayati Chakrabarti, Sulaiman Sheriff, Qian Li, Hahn Nguyen Thi Hong, Ricky A Sontz, Zoe E Mendoza, Amanda Schreibeis, Michael A Helmrath, Yana Zavros and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Gastroenterology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
9.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Pooled it
  2. EradicatingBioactive materials · 2026
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  5. Augmenting the Endogenous RBM3 Response Protects Against Burn-Induced Acute Kidney Injury by Enhancing Macrophage-Mediated Resolution of Inflammation.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  6. Recent advances in spasmolytic polypeptide expressing metaplasia research.World journal of gastrointestinal oncology · 2026
    Review
  7. Review
  8. Myeloid-derived suppressor cells modulation in the context of tumor microenvironment for gastric cancer.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2025
    Review
  9. Article
  10. Review
  11. Review
  12. The gut microbiota in cancer immunity and immunotherapy.Cellular & molecular immunology · 2025
    Review
  13. Immune organoid for cancer immunotherapy.Acta pharmaceutica Sinica. B · 2025
    Review
  14. Article
  15. Review
  16. Review
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Lin DingDepartment of Medicine-Gastroenterology & Hepatology, University of Arizona, Tucson, Arizona.
Jayati ChakrabartiDepartment of Cellular & Molecular Medicine, University of Arizona, Tucson, Arizona.
Sulaiman SheriffDepartment of Medicine-Gastroenterology & Hepatology, University of Arizona, Tucson, Arizona.
Qian LiDepartment of Gastroenterology, Xiangya Hospital Central South University, Changsha, Hunan, China.
Hahn Nguyen Thi HongDinh Tien Hoang Institute of Medicine, Vietnam Union of Science and Technology Association, Institute of Biotechnology, Hanoi, Vietnam.
Ricky A SontzDepartment of Medicine-Gastroenterology & Hepatology, University of Arizona, Tucson, Arizona.
Zoe E MendozaDepartment of Medicine-Gastroenterology & Hepatology, University of Arizona, Tucson, Arizona.
Amanda SchreibeisDivision of Pediatric General and Thoracic Surgery, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Michael A HelmrathDivision of Pediatric General and Thoracic Surgery, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Yana ZavrosDepartment of Cellular & Molecular Medicine, University of Arizona, Tucson, Arizona.
Juanita L MerchantDepartment of Medicine-Gastroenterology & Hepatology, University of Arizona, Tucson, Arizona. Electronic address: jmerchant@arizona.edu.
University of Arizona · USCincinnati Children's Hospital Medical Center · USCentral South University · CN

Funding

VITAMIN AP30CA023074 · NCI · UNIVERSITY OF ARIZONA · PI Teri L Bankhead · 1985 to 2026
$110.2M
Uranium as an Environmental Risk Factor for Cancer Among the NavajoU54CA143924 · NCI · UNIVERSITY OF ARIZONA · PI Gloria D. Coronado · 2009 to 2026
$26.7M
Organoids as a Model System for Studying Gastrointestinal DiseaseU19AI116491 · NIAID · UNIVERSITY OF CINCINNATI · PI WEISS, ALISON A. · 2015 to 2019
$4.6M
The role of Hedgehog Signaling in gastric tissue repair and regenerationR01DK083402 · NIDDK · UNIVERSITY OF CINCINNATI · PI ZAVROS, YANA · 2011 to 2019
$3.7M
MDSC Polarization and Helicobacter-Induced Gastric MetaplasiaR01DK118563 · NIDDK · UNIVERSITY OF ARIZONA · PI MERCHANT, JUANITA L. · 2018 to 2021
$1.4M
NCI NIH HHS P30 CA023074NCI NIH HHS U54 CA143924NIAID NIH HHS U19 AI116491NIDDK NIH HHS R01 DK083402NIDDK NIH HHS R01 DK118563
6 · The paper itself

Abstract

BACKGROUND &

aimsA subset of myeloid-derived suppressor cells (MDSCs) that express murine Schlafen4 (SLFN4) or its human ortholog SLFN12L polarize in the Helicobacter-inflamed stomach coincident with intestinal or spasmolytic polypeptide-expressing metaplasia. We propose that individuals with a more robust response to damage-activated molecular patterns and increased Toll-like receptor 9 (TLR9) expression are predisposed to the neoplastic complications of Helicobacter infection.

methodsA mouse or human Transwell co-culture system composed of dendritic cells (DCs), 2-dimensional gastric epithelial monolayers, and Helicobacter were used to dissect the cellular source of interferon-α (IFNα) in the stomach by flow cytometry. Conditioned media from the co-cultures polarized primary myeloid cells. MDSC activity was determined by T-cell suppression assays. In human subjects with intestinal metaplasia or gastric cancer, the rs5743836 TLR9T>C variant was genotyped and linked to TLR9, IFNα, and SLFN12L expression by immunohistochemistry. Nuclear factor-κB binding to the TLR9 C allele was determined by electrophoretic mobility shift assays.

resultsHelicobacter infection induced gastric epithelial and plasmacytoid DC expression of TLR9 and IFNα. Co-culturing primary mouse or human cells with DCs and Helicobacter induced TLR9, IFNα secretion, and SLFN

conclusionsTLR9 plays an essential role in the production of IFNα and polarization of SLFN

Indexed as

Helicobacter InfectionsMyeloid-Derived Suppressor CellsStomach NeoplasmsToll-Like Receptor 9AnimalsHelicobacterHumansInterferon-alphaMetaplasiaMiceNF-kappa BToll-Like Receptor 4Interferon-alphaNF-kappa BTLR4 protein, humanToll-Like Receptor 4Toll-Like Receptor 92-D Organoid-Derived MonolayerDAMPsIFNαPlasmacytoid Dendritic CellsSPEM

Identifiers

PMID35487288
PMCPMC9329252
OpenAlexW4225253430

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.