Evidence map›Paper›PMID 35486376›Full record

ArticlePlant physiology2022

Rising rates of starch degradation during daytime and trehalose 6-phosphate optimize carbon availability.

Hirofumi Ishihara, Saleh Alseekh, Regina Feil, Pumi Perera, Gavin M George, Piotr Niedźwiecki, Stephanie Arrivault, Samuel C Zeeman, Alisdair R Fernie, John E Lunn and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
7.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Metabolic rewiring and biomass redistribution enable optimized mixotrophic growth in Chlamydomonas.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Steady-stateFrontiers in plant science · 2026
    Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Stable Isotope Labeling and Quantification of Photosynthetic Metabolites.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  15. Cell wall regulation by carbon allocation and sugar signaling.Cell surface (Amsterdam, Netherlands) · 2023
    Review
  16. Assessing the impacts of genetic defects on starch metabolism inJournal of the Royal Society, Interface · 2023
    Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 4 countries.

Hirofumi IshiharaMax Planck Institute for Molecular Plant Physiology, Potsdam-Golm, 14476, Germany.ORCID 0000-0002-7658-0473
Saleh AlseekhMax Planck Institute for Molecular Plant Physiology, Potsdam-Golm, 14476, Germany.ORCID 0000-0003-2067-5235
Regina FeilMax Planck Institute for Molecular Plant Physiology, Potsdam-Golm, 14476, Germany.ORCID 0000-0002-9936-1337
Pumi PereraJohn Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0001-7185-6744
Gavin M GeorgeInstitute of Molecular Plant Biology, ETH Zürich, Zürich, Switzerland.ORCID 0000-0001-7880-3952
Piotr NiedźwieckiMax Planck Institute for Molecular Plant Physiology, Potsdam-Golm, 14476, Germany.
Stephanie ArrivaultMax Planck Institute for Molecular Plant Physiology, Potsdam-Golm, 14476, Germany.ORCID 0000-0001-9065-2325
Samuel C ZeemanInstitute of Molecular Plant Biology, ETH Zürich, Zürich, Switzerland.ORCID 0000-0002-2791-0915
Alisdair R FernieMax Planck Institute for Molecular Plant Physiology, Potsdam-Golm, 14476, Germany.ORCID 0000-0001-9000-335X
John E LunnMax Planck Institute for Molecular Plant Physiology, Potsdam-Golm, 14476, Germany.ORCID 0000-0001-8533-3004
Alison M SmithJohn Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID 0000-0001-6927-9650
Mark StittMax Planck Institute for Molecular Plant Physiology, Potsdam-Golm, 14476, Germany.ORCID 0000-0002-4900-1763
Max Planck Institute of Molecular Plant Physiology · DECenter of Plant Systems Biology and Biotechnology · BGETH Zurich · CHJohn Innes Centre · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J004561/1Biotechnology and Biological Sciences Research Council BB/N001389/1
6 · The paper itself

Abstract

Many plants, including Arabidopsis (Arabidopsis thaliana), accumulate starch in the light and remobilize it to support maintenance and growth at night. Starch synthesis and degradation are usually viewed as temporally separate processes. Recently, we reported that starch is also degraded in the light. Degradation rates are generally low early in the day but rise with time. Here, we show that the rate of degradation in the light depends on time relative to dawn rather than dusk. We also show that degradation in the light is inhibited by trehalose 6-phosphate, a signal for sucrose availability. The observed responses of degradation in the light can be simulated by a skeletal model in which the rate of degradation is a function of starch content divided by time remaining until dawn. The fit is improved by extension to include feedback inhibition of starch degradation by trehalose 6-phosphate. We also investigate possible functions of simultaneous starch synthesis and degradation in the light, using empirically parameterized models and experimental approaches. The idea that this cycle buffers growth against falling rates of photosynthesis at twilight is supported by data showing that rates of protein and cell wall synthesis remain high during a simulated dusk twilight. Degradation of starch in the light may also counter over-accumulation of starch in long photoperiods and stabilize signaling around dusk. We conclude that starch degradation in the light is regulated by mechanisms similar to those that operate at night and is important for stabilizing carbon availability and signaling, thus optimizing growth in natural light conditions.

Indexed as

ArabidopsisArabidopsis ProteinsCarbonPhosphatesPhotosynthesisStarchTrehaloseArabidopsis ProteinsCarbonPhosphatesStarchTrehalose

Identifiers

PMID35486376
PMCPMC9342969
OpenAlexW4225113275

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.