Evidence map›Paper›PMID 35485960›Full record

ArticleG3 (Bethesda, Md.)2022

Coexpression of MEIOTIC-TOPOISOMERASE VIB-dCas9 with guide RNAs specific to a recombination hotspot is insufficient to increase crossover frequency in Arabidopsis.

Nataliya E Yelina, Daniel Holland, Sabrina Gonzalez-Jorge, Dominique Hirsz, Ziyi Yang, Ian R Henderson

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Meiosis in crops: from genes to genomes.Journal of experimental botany · 2021
    Review
  12. Rewiring Meiosis for Crop Improvement.Frontiers in plant science · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nataliya E YelinaDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0001-9863-1414
Daniel HollandDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.
Sabrina Gonzalez-JorgeDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0002-0783-1929
Dominique HirszDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0002-6421-6260
Ziyi YangDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0003-1674-2861
Ian R HendersonDepartment of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.ORCID 0000-0001-5066-1489
University of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research Council BB/N007557/1
6 · The paper itself

Abstract

During meiosis, homologous chromosomes pair and recombine, which can result in reciprocal crossovers that increase genetic diversity. Crossovers are unevenly distributed along eukaryote chromosomes and show repression in heterochromatin and the centromeres. Within the chromosome arms, crossovers are often concentrated in hotspots, which are typically in the kilobase range. The uneven distribution of crossovers along chromosomes, together with their low number per meiosis, creates a limitation during crop breeding, where recombination can be beneficial. Therefore, targeting crossovers to specific genome locations has the potential to accelerate crop improvement. In plants, meiotic crossovers are initiated by DNA double-strand breaks that are catalyzed by SPO11 complexes, which consist of 2 catalytic (SPO11-1 and SPO11-2) and 2 noncatalytic subunits (MTOPVIB). We used the model plant Arabidopsis thaliana to coexpress an MTOPVIB-dCas9 fusion protein with guide RNAs specific to the 3a crossover hotspot. We observed that this was insufficient to significantly change meiotic crossover frequency or pattern within 3a. We discuss the implications of our findings for targeting meiotic recombination within plant genomes.

Indexed as

ArabidopsisArabidopsis ProteinsCrossing Over, GeneticHomologous RecombinationMeiosisPlant BreedingPlantsRNA, Guide, CRISPR-Cas SystemsArabidopsis ProteinsRNA, Guide, CRISPR-Cas SystemsCRISPR/Cas9crossovermeiosisMTOPVIBtargeted recombination

Identifiers

PMID35485960
PMCPMC9258527
OpenAlexW4225106300

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.