Evidence map›Paper›PMID 35484692›Full record

ArticleJournal of biomedical optics2022

Automatic detection of head and neck squamous cell carcinoma on histologic slides using hyperspectral microscopic imaging.

Ling Ma, James V Little, Amy Y Chen, Larry Myers, Baran D Sumer, Baowei Fei

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Journal of biomedical optics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 25 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 2 pooled it
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 2 syntheses or guidelines pooled it, 16 citations in OpenAlex.

  1. Pooled it
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  9. LED-based, real-time, hyperspectral imaging device.Journal of medical imaging (Bellingham, Wash.) · 2025
    Article
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  11. An automatic processing framework for hyperspectral histologic images and benchmark dataset.Proceedings of SPIE--the International Society for Optical Engineering · 2025
    Article
  12. Optimization of Transfer Learning of Foundation Models for Hyperspectral Histologic Imaging.Proceedings of SPIE--the International Society for Optical Engineering · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Ling MaUniversity of Texas at Dallas, Department of Bioengineering, Richardson, Texas, United States.
James V LittleEmory University School of Medicine, Department of Pathology and Laboratory Medicine, Atlanta, Georg, United States.
Amy Y ChenEmory University School of Medicine, Department of Otolaryngology, Atlanta, Georgia, United States.
Larry MyersThe University of Texas Southwestern Medical Center, Department of Otolaryngology, Dallas, Texas, United States.
Baran D SumerThe University of Texas Southwestern Medical Center, Department of Otolaryngology, Dallas, Texas, United States.
Baowei FeiUniversity of Texas at Dallas, Department of Bioengineering, Richardson, Texas, United States.
The University of Texas at Dallas · USThe University of Texas Southwestern Medical Center · USEmory University · US

Funding

Image-guided Intravascular Robotic System for Mitral Valve Repair and ImplantsR01HL140325 · NHLBI · GEORGIA INSTITUTE OF TECHNOLOGY · PI DESAI, JAYDEV P., FEI, BAOWEI · 2018 to 2021
$3.0M
A pH Responsive Transistor-like Nanoprobe for Sensitive Detection of Unknown Primary Cancers of the Head and NeckR01CA266146 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Baran D Sumer · 2022 to 2026
$2.8M
ACADEMIC-INDUSTRIAL PARTNERSHIP FOR TRANSLATION OF PET/TRUS GUIDED INTERVENTIONR01CA204254 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2017 to 2021
$2.0M
Nanoprobe-enabled Delineation of Tumor Margins for Improved Surgical TherapyR01CA192221 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GAO, JINMING, SUMER, BARAN D · 2015 to 2019
$1.8M
pH Transistor Nanoprobes for Detection of Occult Nodal MetastasesR01CA211930 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI GAO, JINMING, SUMER, BARAN D · 2017 to 2021
$1.8M
MOLECULAR IMAGING DIRECTED, 3D ULTRASOUND-GUIDED, BIOPSY SYSTEMR01CA156775 · NCI · UNIVERSITY OF TEXAS DALLAS · PI FEI, BAOWEI · 2011 to 2016
$1.7M
STAN-CT: Standardization and Normalization of CT images for Lung Cancer PatientsR21CA231911 · NCI · UNIVERSITY OF KENTUCKY · PI CHEN, JIN, FEI, BAOWEI · 2019 to 2020
$389k
NCI NIH HHS R01 CA156775NCI NIH HHS R01 CA192221NCI NIH HHS R01 CA204254NCI NIH HHS R01 CA211930NCI NIH HHS R01 CA266146NCI NIH HHS R21 CA231911NHLBI NIH HHS R01 HL140325
6 · The paper itself

Abstract

significanceAutomatic, fast, and accurate identification of cancer on histologic slides has many applications in oncologic pathology.

aimThe purpose of this study is to investigate hyperspectral imaging (HSI) for automatic detection of head and neck cancer nuclei in histologic slides, as well as cancer region identification based on nuclei detection. APPROACH: A customized hyperspectral microscopic imaging system was developed and used to scan histologic slides from 20 patients with squamous cell carcinoma (SCC). Hyperspectral images and red, green, and blue (RGB) images of the histologic slides with the same field of view were obtained and registered. A principal component analysis-based nuclei segmentation method was developed to extract nuclei patches from the hyperspectral images and the coregistered RGB images. Spectra-based support vector machine and patch-based convolutional neural networks (CNNs) were implemented for nuclei classification. The CNNs were trained with RGB patches (RGB-CNN) and hyperspectral patches (HSI-CNN) of the segmented nuclei and the utility of the extra spectral information provided by HSI was evaluated. Furthermore, cancer region identification was implemented by image-wise classification based on the percentage of cancerous nuclei detected in each image.

resultsRGB-CNN, which mainly used the spatial information of nuclei, resulted in a 0.81 validation accuracy and 0.74 testing accuracy. HSI-CNN, which utilized the spatial and spectral features of the nuclei, showed significant improvement in classification performance and achieved 0.89 validation accuracy as well as 0.82 testing accuracy. Furthermore, the image-wise cancer region identification based on nuclei detection could generally improve the cancer detection rate.

conclusionsWe demonstrated that the morphological and spectral information contribute to SCC nuclei differentiation and that the spectral information within hyperspectral images could improve classification performance.

Indexed as

Head and Neck NeoplasmsHyperspectral ImagingHumansNeural Networks, ComputerSquamous Cell Carcinoma of Head and NeckSupport Vector Machineclassificationconvolutional neural networkhyperspectral imagingnuclei segmentationsquamous cell carcinomasupport vector machine

Identifiers

PMID35484692
PMCPMC9050479
OpenAlexW4225143112

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.