Evidence map›Paper›PMID 35484554›Full record

ArticleEnvironmental microbiome2022

Insights into the microbiome assembly during different growth stages and storage of strawberry plants.

Expedito Olimi, Peter Kusstatscher, Wisnu Adi Wicaksono, Ahmed Abdelfattah, Tomislav Cernava, Gabriele Berg

Abstract read
In one paragraph

Article in Environmental microbiome, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Expedito OlimiInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.
Peter KusstatscherInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria. peter.kusstatscher@tugraz.at.ORCID http://orcid.org/0000-0002-1168-7675
Wisnu Adi WicaksonoInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.
Ahmed AbdelfattahInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.
Tomislav CernavaInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.
Gabriele BergInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria.

Funding

Horizon 2020 81794
6 · The paper itself

Abstract

backgroundMicrobiome assembly was identified as an important factor for plant growth and health, but this process is largely unknown, especially for the fruit microbiome. Therefore, we analyzed strawberry plants of two cultivars by focusing on microbiome tracking during the different growth stages and storage using amplicon sequencing, qPCR, and microscopic approaches.

resultsStrawberry plants carried a highly diverse microbiome, therein the bacterial families Sphingomonadaceae (25%), Pseudomonadaceae (17%), and Burkholderiaceae (11%); and the fungal family Mycosphaerella (45%) were most abundant. All compartments were colonized by high number of bacteria and fungi (10

conclusionOur findings provide insights into microbiome assembly in strawberry plants and highlight the importance of microbe transfer during fruit development and storage with potential implications for food health and safety.

Indexed as

Amplicon sequencingBacterial communitiesCLSMFragaria × ananassaFruit pathogensFungal communitiesMicrobiome assembly

Identifiers

PMID35484554
PMCPMC9052558

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.