Evidence map›Paper›PMID 35484416›Full record

ArticleMicrobial ecology2023

DNA Metabarcoding Reveals Cryptic Diversity in Forest Soils on the Isolated Brazilian Trindade Island, South Atlantic.

Paulo E A S Câmara, Fábio Leal Viana Bones, Fabyano Alvares Cardoso Lopes, Fabio S Oliveira, Cristine Chaves Barreto, Diego Knop Henriques, Larissa Paraguassu Campos, Micheline Carvalho-Silva, Peter Convey, Luiz Henrique Rosa

Abstract read
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In one paragraph

Article in Microbial ecology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 3 countries.

Paulo E A S CâmaraDepartamento de Botânica, Universidade de Brasília, Brasília, Brasil. pcamara@unb.br.ORCID http://orcid.org/0000-0002-3944-996X
Fábio Leal Viana BonesPós Graduação Em Plantas, Fungos E Algas, Universidade Federal de Santa Catarina, Florianópolis, Brasil.
Fabyano Alvares Cardoso LopesLaboratório de Microbiologia, Universidade Federal Do Tocantins, Palmas, Brasil.
Fabio S OliveiraDepartamento de Geografia, Universidade Federal de Minas Gerais, Belo Horizonte, Brasil.
Cristine Chaves BarretoUniversidade Católica de Brasília, Brasília, Brasil.
Diego Knop HenriquesDepartamento de Botânica, Universidade de Brasília, Brasília, Brasil.
Larissa Paraguassu CamposDepartamento de Geologia, Universidade Federal de Ouro Preto, Ouro Preto, Brasil.
Micheline Carvalho-SilvaDepartamento de Botânica, Universidade de Brasília, Brasília, Brasil.
Peter ConveyBritish Antarctic Survey, Cambridge, UK.
Luiz Henrique RosaDepartamento de Microbiologia, Universidade Federal de Minas Gerais, Belo Horizonte, MG, Brasil.
Universidade de Brasília · BRUniversidade Federal de Minas Gerais · BRBritish Antarctic Survey · GBUniversidade Católica de Brasília · BRUniversidade Federal de Ouro Preto · BRUniversidade Federal de Santa Catarina · BRUniversidade Federal do Tocantins · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Located 1140 km from the South American coastline in the South Atlantic Ocean and with an age of 4 million years, Trindade Island is the most recent volcanic component of Brazilian territory. Its original native vegetation has been severely damaged by human influence, in particular through the introduction of exotic grazing animals such as goats. However, since the complete eradication of goats and other feral animals in the late 1990s, the island's vegetation has been recovering, and even some endemic species that had been considered extinct have been rediscovered. In this study, we set out to characterize the contemporary cryptic diversity in soils of the recovering native forest of Trindade Island using metabarcoding by high throughput sequencing (HTS). The sequence diversity obtained was dominated by microorganisms, including three domains (Bacteria, Archaea, and Eukarya) and five kingdoms (Fungi, Metazoa, Protozoa, Chromista, and Viridiplantae). Bacteria were represented by 20 phyla and 116 taxa, with Archaea by only one taxon. Fungi were represented by seven phyla and 250 taxa, Viridiplantae by five phyla and six taxa, Protozoa by five phyla and six taxa, Metazoa by three phyla and four taxa and Chromista by two phyla and two taxa. Even after the considerable anthropogenic impacts and devastation of the island's natural forest, our sequence data reveal the presence of a rich and complex diversity of microorganisms, invertebrates, and plants and provide important baseline biodiversity information that will contribute to ecological restoration efforts on the island.

Indexed as

DNA Barcoding, TaxonomicSoilAnimalsArchaeaBacteriaBiodiversityBrazilChild, PreschoolEukaryotaForestsFungiHumansPlantsSoilConservationEnvironmental DNASoilSouth Atlantic islands

Identifiers

PMID35484416
OpenAlexW4224993537

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.