Evidence map›Paper›PMID 35484273›Full record

ArticleScientific data2022

A European-wide dataset to uncover adaptive traits of Listeria monocytogenes to diverse ecological niches.

Benjamin Félix, Yann Sevellec, Federica Palma, Pierre Emmanuel Douarre, Arnaud Felten, Nicolas Radomski, Ludovic Mallet, Yannick Blanchard, Aurélie Leroux, Christophe Soumet and 32 more

Open access · goldAbstract readDataset
In one paragraph

Article in Scientific data, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.9field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Frontiers in microbiology · 2026
    Article
  3. International journal of microbiology · 2026
    Article
  4. Listeriosis.Nature reviews. Disease primers · 2025
    Review
  5. Quantitative Risk Assessment ofFoods (Basel, Switzerland) · 2025
    Article
  6. Article
  7. A Quantitative Risk Assessment Model forFoods (Basel, Switzerland) · 2025
    Article
  8. Article
  9. A Quantitative Risk Assessment Model forFoods (Basel, Switzerland) · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Microorganisms · 2023
    Article
  16. Article
  17. Characterisation ofFoods (Basel, Switzerland) · 2022
    Article
  18. Article
  19. Frontiers in microbiology · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

42 authors at 20 institutions in 17 countries.

Benjamin FélixFrench Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Salmonella and Listeria Unit, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France. benjamin.felix@anses.fr.ORCID 0000-0002-8658-8874
Yann SevellecFrench Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Salmonella and Listeria Unit, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.
Federica PalmaFrench Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Salmonella and Listeria Unit, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.
Pierre Emmanuel DouarreFrench Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Salmonella and Listeria Unit, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.
Arnaud FeltenANSES, Laboratory for Food Safety, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.
Nicolas RadomskiANSES, Laboratory for Food Safety, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.ORCID 0000-0002-7480-4197
Ludovic MalletANSES, Laboratory for Food Safety, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.ORCID 0000-0002-3246-389X
Yannick BlanchardANSES, Ploufragan/Plouzané/Niort Laboratory, Viral Genetics and Bio-Security Unit, Université Européenne de Bretagne, Ploufragan, France.
Aurélie LerouxANSES, Ploufragan/Plouzané/Niort Laboratory, Viral Genetics and Bio-Security Unit, Université Européenne de Bretagne, Ploufragan, France.
Christophe SoumetANSES, Antibiotics, Biocides, Residues and Resistance Unit, 10 B rue Claude Bourgelat - Javené, CS 40608, 35306, Fougères, France.ORCID 0000-0001-5721-8068
Arnaud BridierANSES, Antibiotics, Biocides, Residues and Resistance Unit, 10 B rue Claude Bourgelat - Javené, CS 40608, 35306, Fougères, France.ORCID 0000-0002-7221-8944
Pascal PiveteauINRAE, Unité de recherche OPAALE, 35000, Rennes, France.
Eliette AscensioINRAE, Agroecologie, AgroSup Dijon, INRA, Univ. Bourgogne Franche-Comté, 21000, Dijon, France.ORCID 0000-0001-8401-8053
Michel HébraudINRAE, UCA, UMR MEDiS, F-63122, Saint-Genès Champanelle, France.
Renáta KarpíškováVeterinary Research Institute, Hudcova 70, 621 00, Brno, Czech Republic.
Tereza GelbíčováVeterinary Research Institute, Hudcova 70, 621 00, Brno, Czech Republic.
Marina TorresiIZSAM, Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise G.CaporaleVia Campo Boario, 64100, Teramo, Italy.ORCID 0000-0002-4684-7886
Francesco PomilioIZSAM, Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise G.CaporaleVia Campo Boario, 64100, Teramo, Italy.
Cesare CammàIZSAM, Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise G.CaporaleVia Campo Boario, 64100, Teramo, Italy.
Adriano Di PasqualeIZSAM, Istituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise G.CaporaleVia Campo Boario, 64100, Teramo, Italy.
Taran SkjerdalNorwegian Veterinary Institute, Food Safety and Animal Health Research, Ullevålsvegen 68, 0454, Oslo, Norway.
Ariane PietzkaAGES Austrian Agency for Health and Food Safety, Spargelfeldstrasse 191, 1220, Vienna, Austria.
Werner RuppitschAGES Austrian Agency for Health and Food Safety, Spargelfeldstrasse 191, 1220, Vienna, Austria.
Monica Ricão CanelhasDepartment of Biology, Swedish Food Agency, Uppsala, Sweden.
Bojan PapićInstitute of Microbiology and Parasitology, Veterinary Faculty, University of Ljubljana, Gerbičeva 60, 1000, Ljubljana, Slovenia.
Ana HurtadoAnimal Health Department, NEIKER - Basque Institute for Agricultural Research and Development, Basque Research and Technology Alliance (BRTA), Bizkaia Science and Technology Park 812 L, 48160, Derio, Spain.ORCID 0000-0001-7089-9670
Bart WullingsWageningen Food Safety Research, Wageningen University & Research, Wageningen, the Netherlands.
Hana BulawovaState Veterinary Institute, Rantířovská 93/20, 586 05, Jihlava, Czech Republic.
Hanna CastroDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Agnes Sjöbergin katu 2, 00790, Helsinki, Finland.
Miia LindströmDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Agnes Sjöbergin katu 2, 00790, Helsinki, Finland.
Hannu KorkealaDepartment of Food Hygiene and Environmental Health, Faculty of Veterinary Medicine, University of Helsinki, Agnes Sjöbergin katu 2, 00790, Helsinki, Finland.ORCID 0000-0003-0699-1290
Žanete ŠteingoldeInstitute of Food Safety, Animal Health and Environment BIOR, Riga, Latvia.
Toomas KramarenkoVeterinary and Food Laboratory, F. R. Kreutzwaldi 30, 51006, Tartu, Estonia.
Lenka CabanovaState veterinary and food institute DVM, Department of Food Hygiene, Veterinary and food institute, Janoskova 1611/58, Dolny Kubin, Slovakia.
Barbara SzymczakDepartment of Applied Microbiology and Human Nutrition Physiology, West Pomeranian University of Technology, Szczecin, Poland.ORCID 0000-0002-3264-3559
Manfred GareisChair of Food Safety, Faculty of Veterinary Medicine, Ludwig-Maximilians-University Munich, Oberschleissheim, Germany.
Verena OswaldiInstitute of Food Safety and Food Hygiene, Working Group Meat Hygiene, Faculty of Veterinary Medicine, Freie Universität Berlin, Berlin, Germany.
Elisabet MartiAgroscope, Food Microbial Systems, Berne-Liebefeld, Bern, Switzerland.
Anne-Mette SeyfarthDTU, Technical University of Denmark, National Food Institute, Lyngby, Denmark.
Jean-Charles LeblancFrench Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Salmonella and Listeria Unit, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.
Laurent GuillierFrench Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Salmonella and Listeria Unit, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.ORCID 0000-0002-7867-2937
Sophie RousselFrench Agency for Food, Environmental and Occupational Health & Safety (ANSES), Laboratory for Food Safety, Salmonella and Listeria Unit, Paris-Est University, 14 rue Pierre et Marie Curie, 94701, Maisons-Alfort, France.
Agence Nationale de Sécurité Sanitaire de l’Alimentation, de l’Environnement et du Travail · FRIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise G. Caporale · ITUniversity of Helsinki · FIAustrian Agency for Health and Food Safety · ATCentre Hospitalier de Fougères · FRInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRUniversité Européenne de Bretagne · FRVeterinary Research Institute · CZAgroscope · CHEuskadiko Parke Teknologikoa · ESFood Research Institute · SKFreie Universität Berlin · DEInstitute of Food Safety, Animal Health and Environment “BIOR” · LVLudwig-Maximilians-Universität München · DENational Food Administration · SENorwegian Veterinary Institute · NOState Veterinary Administration · CZTechnical University of Denmark · DKUniversité Clermont Auvergne · FRUniversity of Ljubljana · SI

Funding

EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 773830
6 · The paper itself

Abstract

Listeria monocytogenes (Lm) is a ubiquitous bacterium that causes listeriosis, a serious foodborne illness. In the nature-to-human transmission route, Lm can prosper in various ecological niches. Soil and decaying organic matter are its primary reservoirs. Certain clonal complexes (CCs) are over-represented in food production and represent a challenge to food safety. To gain new understanding of Lm adaptation mechanisms in food, the genetic background of strains found in animals and environment should be investigated in comparison to that of food strains. Twenty-one partners, including food, environment, veterinary and public health laboratories, constructed a dataset of 1484 genomes originating from Lm strains collected in 19 European countries. This dataset encompasses a large number of CCs occurring worldwide, covers many diverse habitats and is balanced between ecological compartments and geographic regions. The dataset presented here will contribute to improve our understanding of Lm ecology and should aid in the surveillance of Lm. This dataset provides a basis for the discovery of the genetic traits underlying Lm adaptation to different ecological niches.

Indexed as

Foodborne DiseasesListeria monocytogenesListeriosisAnimalsEcosystem

Identifiers

PMID35484273
PMCPMC9050667
OpenAlexW4225006966

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.