Evidence map›Paper›PMID 35484235›Full record

ArticleNature structural & molecular biology2022

True-atomic-resolution insights into the structure and functional role of linear chains and low-barrier hydrogen bonds in proteins.

Valentin Borshchevskiy, Kirill Kovalev, Ekaterina Round, Rouslan Efremov, Roman Astashkin, Gleb Bourenkov, Dmitry Bratanov, Taras Balandin, Igor Chizhov, Christian Baeken and 9 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
5.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 53 citations in OpenAlex.

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  5. Flexibility and Hydration of the QJournal of chemical information and modeling · 2025
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  16. Mechanisms of inward transmembrane proton translocation.Nature structural & molecular biology · 2023
    Article
  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 9 institutions in 4 countries.

Valentin Borshchevskiy *Institute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany.ORCID http://orcid.org/0000-0003-4398-9712
Kirill Kovalev *European Molecular Biology Laboratory, Hamburg unit c/o DESY, Hamburg, Germany.
Ekaterina Round *European X-ray Free Electron Laser GmbH, Schenefeld, Germany.
Rouslan EfremovStructural Biology Brussels, Department of Bioengineering Sciences, Vrije Universiteit Brussel, Brussels, Belgium.ORCID http://orcid.org/0000-0001-7516-8658
Roman AstashkinResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia.
Gleb BourenkovEuropean Molecular Biology Laboratory, Hamburg unit c/o DESY, Hamburg, Germany.ORCID http://orcid.org/0000-0002-2617-5920
Dmitry BratanovInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany.
Taras BalandinInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany.
Igor ChizhovInstitute for Biophysical Chemistry, Hannover Medical School, Hannover, Germany.
Christian BaekenInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany.
Ivan GushchinResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia.ORCID http://orcid.org/0000-0002-5348-6070
Alexander KuzminResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia.ORCID http://orcid.org/0000-0003-3945-3691
Alexey AlekseevResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia.
Andrey RogachevResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia.
Dieter WillboldInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany.ORCID http://orcid.org/0000-0002-0065-7366
Martin EngelhardDepartment of Structural Biochemistry, Max Planck Institute for Physiology, Dortmund, Germany.ORCID http://orcid.org/0000-0003-1921-9830
Ernst BambergMax Planck Institute of Biophysics, Frankfurt am Main, Germany.
Georg BüldtResearch Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, Russia.
Valentin GordeliyInstitute of Biological Information Processing (IBI-7: Structural Biochemistry), Forschungszentrum Jülich, Jülich, Germany. valentin.gordeliy@ibs.fr.ORCID http://orcid.org/0000-0001-5782-5896
Moscow Institute of Physics and Technology · RUForschungszentrum Jülich · DECentre National de la Recherche Scientifique · FREuropean Molecular Biology Laboratory · DEEuropean X-Ray Free-Electron Laser · DEMax Planck Institute of Biophysics · DEMax Planck Institute of Molecular Physiology · DEMedizinische Hochschule Hannover · DEVrije Universiteit Brussel · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hydrogen bonds are fundamental to the structure and function of biological macromolecules and have been explored in detail. The chains of hydrogen bonds (CHBs) and low-barrier hydrogen bonds (LBHBs) were proposed to play essential roles in enzyme catalysis and proton transport. However, high-resolution structural data from CHBs and LBHBs is limited. The challenge is that their 'visualization' requires ultrahigh-resolution structures of the ground and functionally important intermediate states to identify proton translocation events and perform their structural assignment. Our true-atomic-resolution structures of the light-driven proton pump bacteriorhodopsin, a model in studies of proton transport, show that CHBs and LBHBs not only serve as proton pathways, but also are indispensable for long-range communications, signaling and proton storage in proteins. The complete picture of CHBs and LBHBs discloses their multifunctional roles in providing protein functions and presents a consistent picture of proton transport and storage resolving long-standing debates and controversies.

Indexed as

ProteinsProtonsHydrogen BondingProteinsProtons

Identifiers

PMID35484235
OpenAlexW4225152680

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.