Evidence map›Paper›PMID 35484234›Full record

ArticleNature structural & molecular biology2022

Single-stranded nucleic acid binding and coacervation by linker histone H1.

Rachel Leicher, Adewola Osunsade, Gabriella N L Chua, Sarah C Faulkner, Andrew P Latham, John W Watters, Tuan Nguyen, Emily C Beckwitt, Sophia Christodoulou-Rubalcava, Paul G Young and 3 more

Open access · greenAbstract read
In one paragraph

Article in Nature structural & molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 68 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Measuring bridging forces in protein-DNA condensates.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Article
  9. Article
  10. Protamine Drives Liquid and Solid Condensation of DNA and Glycosaminoglycans.Langmuir : the ACS journal of surfaces and colloids · 2025
    Article
  11. Review
  12. Phase Separation in Chromatin Organization and Human Diseases.International journal of molecular sciences · 2025
    Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Rachel Leicher *Laboratory of Nanoscale Biophysics and Biochemistry, The Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0002-3187-1234
Adewola Osunsade *Tri-Institutional PhD Program in Chemical Biology, New York, NY, USA.ORCID http://orcid.org/0000-0001-6340-8765
Gabriella N L Chua *Laboratory of Nanoscale Biophysics and Biochemistry, The Rockefeller University, New York, NY, USA.
Sarah C Faulkner *Chemical Biology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center (MSKCC), New York, NY, USA.
Andrew P LathamDepartment of Chemistry, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-9338-7253
John W WattersLaboratory of Nanoscale Biophysics and Biochemistry, The Rockefeller University, New York, NY, USA.ORCID http://orcid.org/0000-0001-5786-8861
Tuan NguyenLaboratory of Nanoscale Biophysics and Biochemistry, The Rockefeller University, New York, NY, USA.
Emily C BeckwittLaboratory of DNA Replication, Howard Hughes Medical Institute, The Rockefeller University, New York, NY, USA.
Sophia Christodoulou-RubalcavaTri-Institutional PhD Program in Chemical Biology, New York, NY, USA.
Paul G YoungTri-Institutional MD-PhD Program, New York, NY, USA.
Bin ZhangDepartment of Chemistry, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-3685-7503
Yael DavidTri-Institutional PhD Program in Chemical Biology, New York, NY, USA. davidshy@mskcc.org.ORCID http://orcid.org/0000-0003-1696-0025
Shixin LiuLaboratory of Nanoscale Biophysics and Biochemistry, The Rockefeller University, New York, NY, USA. shixinliu@rockefeller.edu.ORCID http://orcid.org/0000-0003-4238-7066
Tri-Institutional PhD Program in Chemical Biology · USMemorial Sloan Kettering Cancer Center · USMassachusetts Institute of Technology · USHoward Hughes Medical Institute · USRockefeller University · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Genetics and Cell BiologyT32GM066699 · NIGMS · ROCKEFELLER UNIVERSITY · PI STRICKLAND, SIDNEY · 2004 to 2021
$7.6M
Probing and Perturbing Transcriptional Condensates with Multiscale Modeling and Deep LearningR35GM133580 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Bin Zhang · 2019 to 2026
$3.1M
Probing Symmetry Breaking in Epigenetic Inheritance: From Single Molecules to Systems BiologyDP2HG010510 · NHGRI · ROCKEFELLER UNIVERSITY · PI LIU, SHIXIN · 2018 to 2018
$2.5M
Investigating histone glycation as a new dynamic epigenetic markR35GM138386 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI DAVID-SHTERNBERG, YAEL E · 2020 to 2024
$2.2M
Genetics and Cell Biology Training ProgramT32GM144299 · NIGMS · ROCKEFELLER UNIVERSITY · PI Viviana I Risca, Tim Stearns · 2022 to 2026
$2.1M
NCI NIH HHS P30 CA008748NHGRI NIH HHS DP2 HG010510NIGMS NIH HHS R35 GM133580NIGMS NIH HHS R35 GM138386NIGMS NIH HHS T32 GM007739NIGMS NIH HHS T32 GM066699NIGMS NIH HHS T32 GM144299
6 · The paper itself

Abstract

The H1 linker histone family is the most abundant group of eukaryotic chromatin-binding proteins. However, their contribution to chromosome structure and function remains incompletely understood. Here we use single-molecule fluorescence and force microscopy to directly visualize the behavior of H1 on various nucleic acid and nucleosome substrates. We observe that H1 coalesces around single-stranded DNA generated from tension-induced DNA duplex melting. Using a droplet fusion assay controlled by optical tweezers, we find that single-stranded nucleic acids mediate the formation of gel-like H1 droplets, whereas H1-double-stranded DNA and H1-nucleosome droplets are more liquid-like. Molecular dynamics simulations reveal that multivalent and transient engagement of H1 with unpaired DNA strands drives their enhanced phase separation. Using eGFP-tagged H1, we demonstrate that inducing single-stranded DNA accumulation in cells causes an increase in H1 puncta that are able to fuse. We further show that H1 and Replication Protein A occupy separate nuclear regions, but that H1 colocalizes with the replication factor Proliferating Cell Nuclear Antigen, particularly after DNA damage. Overall, our results provide a refined perspective on the diverse roles of H1 in genome organization and maintenance, and indicate its involvement at stalled replication forks.

Indexed as

HistonesNucleosomesChromatinDNADNA, Single-StrandedProtein BindingChromatinDNADNA, Single-StrandedHistonesNucleosomes

Identifiers

PMID35484234
PMCPMC9117509
OpenAlexW4225138787

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.