Evidence map›Paper›PMID 35484173›Full record

ArticleScientific reports2022

Airway epithelial interferon response to SARS-CoV-2 is inferior to rhinovirus and heterologous rhinovirus infection suppresses SARS-CoV-2 replication.

Elizabeth R Vanderwall, Kaitlyn A Barrow, Lucille M Rich, David F Read, Cole Trapnell, Oghenemega Okoloko, Steven F Ziegler, Teal S Hallstrand, Maria P White, Jason S Debley

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Elizabeth R VanderwallCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, 1900 Ninth Ave., Seattle, WA, 98145, USA.
Kaitlyn A BarrowCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, 1900 Ninth Ave., Seattle, WA, 98145, USA.
Lucille M RichCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, 1900 Ninth Ave., Seattle, WA, 98145, USA.
David F ReadDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Cole TrapnellDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Oghenemega OkolokoCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, 1900 Ninth Ave., Seattle, WA, 98145, USA.
Steven F ZieglerCenter for Fundamental Immunology, Benaroya Research Institute at Virginia Mason, Seattle, WA, USA.
Teal S HallstrandDivision of Pulmonary, Critical Care, and Sleep Medicine and the Center for Lung Biology, University of Washington, Seattle, WA, USA.
Maria P WhiteCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, 1900 Ninth Ave., Seattle, WA, 98145, USA.
Jason S DebleyCenter for Immunity and Immunotherapies, Seattle Children's Research Institute, 1900 Ninth Ave., Seattle, WA, 98145, USA. Jason.debley@seattlechildrens.org.ORCID 0000-0001-6438-9535

Funding

Regulation of the Innate Immune Response by the Epithelium in AsthmaU19AI125378 · NIAID · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI ZIEGLER, STEVEN F · 2016 to 2020
$9.2M
Dysregulated asthmatic epithelial interferon responses to viruses drive exacerbation, T2 inflammation, and airway remodelingR01AI163160 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI JASON S DEBLEY · 2022 to 2026
$4.3M
Impact of Heterogeneous Airway Epithelial ACE2 Expression and Interferon Responses on SARS-CoV2 Infectivity and ReplicationK24AI150991 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI DEBLEY, JASON S · 2020 to 2024
$1.2M
NIAID NIH HHS K24 AI150991NIAID NIH HHS R01 AI163160NIAID NIH HHS U19 AI125378NIH HHS K24AI150991-01S1NIH HHS U19AI125378-05S1
6 · The paper itself

Abstract

Common alphacoronaviruses and human rhinoviruses (HRV) induce type I and III interferon (IFN) responses important to limiting viral replication in the airway epithelium. In contrast, highly pathogenic betacoronaviruses including SARS-CoV-2 may evade or antagonize RNA-induced IFN I/III responses. In airway epithelial cells (AECs) from children and older adults we compared IFN I/III responses to SARS-CoV-2 and HRV-16, and assessed whether pre-infection with HRV-16, or pretreatment with recombinant IFN-β or IFN-λ, modified SARS-CoV-2 replication. Bronchial AECs from children (ages 6-18 years) and older adults (ages 60-75 years) were differentiated ex vivo to generate organotypic cultures. In a biosafety level 3 (BSL-3) facility, cultures were infected with SARS-CoV-2 or HRV-16, and RNA and protein was harvested from cell lysates 96 h. following infection and supernatant was collected 48 and 96 h. following infection. In additional experiments cultures were pre-infected with HRV-16, or pre-treated with recombinant IFN-β1 or IFN-λ2 before SARS-CoV-2 infection. In a subset of experiments a range of infectious concentrations of HRV-16, SARS-CoV-2 WA-01, SARS-CoV-2 Delta variant, and SARS-CoV-2 Omicron variant were studied. Despite significant between-donor heterogeneity SARS-CoV-2 replicated 100 times more efficiently than HRV-16. IFNB1, INFL2, and CXCL10 gene expression and protein production following HRV-16 infection was significantly greater than following SARS-CoV-2. IFN gene expression and protein production were inversely correlated with SARS-CoV-2 replication. Treatment of cultures with recombinant IFNβ1 or IFNλ2, or pre-infection of cultures with HRV-16, markedly reduced SARS-CoV-2 replication. In addition to marked between-donor heterogeneity in IFN responses and viral replication, SARS-CoV-2 (WA-01, Delta, and Omicron variants) elicits a less robust IFN response in primary AEC cultures than does rhinovirus, and heterologous rhinovirus infection, or treatment with recombinant IFN-β1 or IFN-λ2, reduces SARS-CoV-2 replication, although to a lesser degree for the Delta and Omicron variants.

Indexed as

COVID-19 Drug TreatmentInterferonsAdolescentAgedAntiviral AgentsChildHumansMiddle AgedRhinovirusRNASARS-CoV-2Antiviral AgentsInterferonsRNA

Identifiers

PMID35484173
PMCPMC9048621

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.