Evidence map›Paper›PMID 35483881›Full record

ArticleCold Spring Harbor molecular case studies2022

Pathogenic ATM and BAP1 germline mutations in a case of early-onset, familial sarcomatoid renal cancer.

Hannah N Bell, Chandan Kumar-Sinha, Rahul Mannan, Dana Zakalik, Yuping Zhang, Rohit Mehra, Deepa Jagtap, Saravana M Dhanasekaran, Ulka Vaishampayan

Open access · greenAbstract readCase Reports
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Hannah N Bell *University of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Chandan Kumar-Sinha *Department of Molecular and Integrative Physiology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Rahul MannanUniversity of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Dana ZakalikOakland University/Beaumont Hospital, Rochester, Michigan 48309, USA.
Yuping ZhangDepartment of Molecular and Integrative Physiology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Rohit MehraUniversity of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
Deepa JagtapOakland University/Beaumont Hospital, Rochester, Michigan 48309, USA.
Saravana M DhanasekaranDepartment of Molecular and Integrative Physiology, University of Michigan, Ann Arbor, Michigan 48109, USA.
Ulka VaishampayanUniversity of Michigan Medical School, Ann Arbor, Michigan 48109, USA.
University of Michigan–Ann Arbor · USMichigan Center for Translational Pathology · US

Funding

MICHIGAN MEDICAL SCIENTIST TRAINING PROGRAMT32GM007863 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 1985 to 2024
$38.3M
SYTEMS AND INTEGRATIVE BIOLOGYT32GM008322 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LOW, MALCOLM JAMES · 1990 to 2020
$5.7M
Defining the role of microenvironmental ammonia in colorectal cancersF30CA257292 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BELL, HANNAH NOELLE · 2021 to 2022
$40k
NCI NIH HHS F30 CA257292NIGMS NIH HHS T32 GM007863NIGMS NIH HHS T32 GM008322
6 · The paper itself

Abstract

Metastatic renal cell carcinoma (RCC) remains an incurable malignancy, despite recent advances in systemic therapies. Genetic syndromes associated with kidney cancer account for only 5%-8% of all diagnosed kidney malignancies, and genetic predispositions to kidney cancer predisposition are still being studied. Genomic testing for kidney cancer is useful for disease molecular subtyping but provides minimal therapeutic information. Understanding how aberrations drive RCC development and how their contextual influences, such as chromosome loss, genome instability, and DNA methylation changes, may alter therapeutic response is of importance. We report the case of a 36-yr-old female with aggressive, metastatic RCC and a significant family history of cancer, including RCC. This patient harbors a novel, pathogenic, germline ATM mutation along with a rare germline variant of unknown significance in the

Indexed as

Carcinoma, Renal CellKidney NeoplasmsSarcomaSoft Tissue NeoplasmsAdultAtaxia Telangiectasia Mutated ProteinsFemaleGenomic InstabilityGerm-Line MutationHumansTumor Suppressor ProteinsUbiquitin ThiolesteraseAtaxia Telangiectasia Mutated ProteinsATM protein, humanBAP1 protein, humanTumor Suppressor ProteinsUbiquitin Thiolesteraseclear cell renal cell carcinoma

Identifiers

PMID35483881
PMCPMC9059789
OpenAlexW4225149360

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.