Evidence map›Paper›PMID 35482820›Full record

ArticleScience translational medicine2022

Mutations in the SARS-CoV-2 RNA-dependent RNA polymerase confer resistance to remdesivir by distinct mechanisms.

Laura J Stevens, Andrea J Pruijssers, Hery W Lee, Calvin J Gordon, Egor P Tchesnokov, Jennifer Gribble, Amelia S George, Tia M Hughes, Xiaotao Lu, Jiani Li and 7 more

Open access · hybridAbstract read
In one paragraph

Article in Science translational medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 161 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
161citing papers in PubMed, 1 pooled it
24.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

161 citing papers in PubMed, 1 synthesis or guideline pooled it, 240 citations in OpenAlex.

  1. Remdesivir for the treatment of COVID-19.The Cochrane database of systematic reviews · 2023
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101 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Laura J StevensDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0003-4386-6958
Andrea J PruijssersDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0001-7910-626X
Hery W LeeDepartment of Medical Microbiology and Immunology, University of Alberta, Edmonton AB T6G 2T9, Canada.ORCID 0000-0002-3981-0284
Calvin J GordonDepartment of Medical Microbiology and Immunology, University of Alberta, Edmonton AB T6G 2T9, Canada.ORCID 0000-0002-8259-6201
Egor P TchesnokovDepartment of Medical Microbiology and Immunology, University of Alberta, Edmonton AB T6G 2T9, Canada.ORCID 0000-0003-1698-2961
Jennifer GribbleDepartment of Pathology, Microbiology, and Immunology, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0003-0815-5798
Amelia S GeorgeDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0001-6919-2256
Tia M HughesDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0001-5765-3406
Xiaotao LuDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0001-9935-1713
Jiani LiGilead Sciences Inc., Foster City, CA 94404, USA.
Jason K PerryGilead Sciences Inc., Foster City, CA 94404, USA.ORCID 0000-0001-5492-0652
Danielle P PorterGilead Sciences Inc., Foster City, CA 94404, USA.ORCID 0000-0001-8459-2370
Tomas CihlarGilead Sciences Inc., Foster City, CA 94404, USA.
Timothy P SheahanDepartment of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.ORCID 0000-0001-9181-2183
Ralph S BaricDepartment of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.ORCID 0000-0001-6827-8701
Matthias GötteDepartment of Medical Microbiology and Immunology, University of Alberta, Edmonton AB T6G 2T9, Canada.ORCID 0000-0001-6213-5806
Mark R DenisonDepartment of Pediatrics, Vanderbilt University Medical Center, Nashville, TN 37232, USA.ORCID 0000-0003-2655-0900
Vanderbilt University Medical Center · USGilead Sciences (United States) · USUniversity of Alberta · CAUniversity of North Carolina at Chapel Hill · USVanderbilt University · US

Funding

Broad-spectrum antiviral GS-5734 to treat MERS-CoV and related emerging CoVR01AI132178 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BARIC, RALPH S, SHEAHAN, TIMOTHY PATRICK · 2017 to 2021
$7.0M
Determinants of Coronavirus Fidelity in Replication and PathogenesisR01AI108197 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI BARIC, RALPH S, DENISON, MARK R · 2013 to 2022
$6.5M
NIAID NIH HHS R01 AI108197NIAID NIH HHS R01 AI132178
6 · The paper itself

Abstract

The nucleoside analog remdesivir (RDV) is a Food and Drug Administration-approved antiviral for treatment of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections. Thus, it is critical to understand factors that promote or prevent RDV resistance. We passaged SARS-CoV-2 in the presence of increasing concentrations of GS-441524, the parent nucleoside of RDV. After 13 passages, we isolated three viral lineages with phenotypic resistance as defined by increases in half-maximal effective concentration from 2.7- to 10.4-fold. Sequence analysis identified nonsynonymous mutations in nonstructural protein 12 RNA-dependent RNA polymerase (

Indexed as

Antiviral AgentsCOVID-19 Drug TreatmentDrug Resistance, ViralRNA-Dependent RNA PolymeraseSARS-CoV-2Adenosine MonophosphateAlanineAnimalsHumansMiceMutationRNA, ViralAdenosine MonophosphateAlanineAntiviral AgentsremdesivirRNA-Dependent RNA PolymeraseRNA, Viral

Identifiers

PMID35482820
PMCPMC9097878
OpenAlexW4225120401

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.