Evidence map›Paper›PMID 35482104›Full record

ReviewArchives of microbiology2022

Mechanisms of gene regulation by histone degradation in adaptation of yeast: an overview of recent advances.

Safir Ullah Khan, Munir Ullah Khan, Fadia Kalsoom, Muhammad Imran Khan, Shuang Gao, Ahsanullah Unar, Muhammad Zubair, Muhammad Bilal

Abstract readReview
PubMed Publisher
In one paragraph

Review in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Safir Ullah KhanHefei National Laboratory for Physical Sciences at the Microscale, School of Life Sciences, University of Science and Technology of China, Hefei, 230027, People's Republic of China.
Munir Ullah KhanMOE Key Laboratory of Macromolecular Synthesis and Functionalization, Department of Polymer Science and Engineering, Zhejiang University, Hangzhou, 310027, People's Republic of China.
Fadia KalsoomDepartment of Microbiology, Ajou University School of Medicine, Suwon, 16499, Republic of Korea.
Muhammad Imran KhanSchool of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230027, People's Republic of China. imranalmani@mail.ustc.edu.cn.
Shuang GaoSchool of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230027, People's Republic of China.
Ahsanullah UnarSchool of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230027, People's Republic of China.
Muhammad ZubairSchool of Life Sciences and Medicine, University of Science and Technology of China, Hefei, 230027, People's Republic of China.
Muhammad BilalSchool of Life Science and Food Engineering, Huaiyin Institute of Technology, Huaian, 223003, People's Republic of China. bilaluaf@hotmail.com.ORCID http://orcid.org/0000-0001-5388-3183
University of Science and Technology of China · CNAjou University · KRHuaiyin Institute of Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Histones are important component of eukaryotic cells chromatin and consist of arginine and lysine residues. Histones play an important role in the protection of DNA. Their contents significantly affect high-level chromatin structure formation, gene expression, DNA replication, and other important life activities. Protein degradation is an important regulatory mechanism of histone content. Recent studies have revealed that modification of amino acid sequence is directly related to histone breakdown. In addition, histone degradation is closely related to covalent modifications, such as ubiquitination and acetylation, which are considered to be driving factors in gene regulation. Gene regulation is an important mechanism in adaptation to the environment and survival of species. With the introduction of highly efficient technology, various mutations in histones have been identified in yeast. In the field of epigenetics and the transmission of chromatin states, two widely used model organisms are the budding yeast Saccharomyces cerevisiae and Schizosaccharomyces pombe. Higher eukaryotes can use their silent loci to maintain their epigenetic states and providing the base to investigate mechanisms underlying development. Therfore, both species have contributed a plethora of information on these mechanisms in both yeast and higher eukaryotes. This study focuses on the role of histone modifications in controlling telomeric silencing in Saccharomyces cerevisiae and centromeric silencing in S. pombe as examples of genetic loci that demonstrate epigenetic inheritance. In view of recent advances, this review focuses on the post-translational modification of histone amino acid residues and reviews the relationship between histone degradation and amino acid residue modification.

Indexed as

HistonesSaccharomyces cerevisiaeAmino AcidsChromatinProtein Processing, Post-TranslationalAmino AcidsChromatinHistonesBiological significanceEnvironmental factorsHistonePost-translational modificationsSurvival and apoptosis

Identifiers

PMID35482104
OpenAlexW4225107244

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.