Evidence map›Paper›PMID 35481643›Full record

ArticleProtein science : a publication of the Protein Society2022

Structural basis for the helical filament formation of Escherichia coli glutamine synthetase.

Pei-Chi Huang, Shao-Kang Chen, Wei-Hung Chiang, Meng-Ru Ho, Kuen-Phon Wu

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Glutamine metabolic enzymes: to filament or not to filament?Biochemical Society transactions · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
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  9. Review
  10. Structural basis for the helical filament formation of Escherichia coli glutamine synthetase.Protein science : a publication of the Protein Society · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Pei-Chi HuangInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Shao-Kang ChenInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Wei-Hung ChiangInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Meng-Ru HoInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.
Kuen-Phon WuInstitute of Biological Chemistry, Academia Sinica, Taipei, Taiwan.ORCID 0000-0002-1525-6004
Institute of Biological Chemistry, Academia Sinica · TWNational Taiwan Normal University · TWNational Taiwan University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Escherichia coli glutamine synthetase (EcGS) spontaneously forms a dodecamer that catalytically converts glutamate to glutamine. EcGS stacks with other dodecamers to create a filament-like polymer visible under transmission electron microscopy. Filamentous EcGS is induced by environmental metal ions. We used cryo-electron microscopy (cryo-EM) to decipher the structure of metal ion (nickel)-induced EcGS helical filament at a sub-3Å resolution. EcGS filament formation involves stacking of native dodecamers by chelating nickel ions to residues His5 and His13 in the first N-terminal helix (H1). His5 and His13 from paired parallel H1 helices provide salt bridges and hydrogen bonds to tightly stack two dodecamers. One subunit of the EcGS filament hosts two nickel ions, whereas the dodecameric interface and the ATP/Mg-binding site both host a nickel ion each. We reveal that upon adding glutamate or ATP for catalytic reactions, nickel-induced EcGS filament reverts to individual dodecamers. Such tunable filament formation is often associated with stress responses. Our results provide detailed structural information on the mechanism underlying reversible and tunable EcGS filament formation.

Indexed as

Escherichia coliGlutamate-Ammonia LigaseAdenosine TriphosphateCryoelectron MicroscopyGlutamatesMacromolecular SubstancesMetalsNickelAdenosine TriphosphateGlutamate-Ammonia LigaseGlutamatesMacromolecular SubstancesMetalsNickelcryo-EMdodecamerglutamine synthetasehelical filament

Identifiers

PMID35481643
PMCPMC8996467
OpenAlexW4223543324

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.