Evidence map›Paper›PMID 35481623›Full record

ArticleMolecular genetics & genomic medicine2022

Mutation spectrum of congenital heart disease in a consanguineous Turkish population.

Weilai Dong, Hande Kaymakcalan, Sheng Chih Jin, Nicholas S Diab, Cansaran Tanıdır, Ali Seyfi Yalim Yalcin, A Gulhan Ercan-Sencicek, Shrikant Mane, Murat Gunel, Richard P Lifton and 2 more

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Recessive genetic contribution to congenital heart disease in 5,424 probands.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  3. Review
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

Weilai DongDepartment of Genetics, Yale School of Medicine, New Haven, Connecticut, USA.
Hande KaymakcalanDepartment of Pediatrics, Demiroglu Bilim University, Istanbul, Turkey.ORCID 0000-0001-7736-7634
Sheng Chih JinDepartment of Genetics, Washington University School of Medicine, St. Louis, Missouri, USA.ORCID 0000-0002-5777-7262
Nicholas S DiabDepartment of Genetics, Yale School of Medicine, New Haven, Connecticut, USA.
Cansaran TanıdırDepartment of Pediatrics, Mehmet Akif Ersoy Hospital, Istanbul, Turkey.
Ali Seyfi Yalim YalcinDepartment of Pediatrics, Demiroglu Bilim University, Istanbul, Turkey.
A Gulhan Ercan-SencicekDepartment of Genetics, Yale School of Medicine, New Haven, Connecticut, USA.ORCID 0000-0003-2838-3341
Shrikant ManeDepartment of Genetics, Yale School of Medicine, New Haven, Connecticut, USA.
Murat GunelDepartment of Genetics, Yale School of Medicine, New Haven, Connecticut, USA.
Richard P LiftonLaboratory of Human Genetics and Genomics, The Rockefeller University, New York, New York, USA.
Kaya BilguvarDepartment of Genetics, Yale School of Medicine, New Haven, Connecticut, USA.
Martina BruecknerDepartment of Genetics, Yale School of Medicine, New Haven, Connecticut, USA.
Yale University · USIstanbul Bilim University · TRBurdur Mehmet Akif Ersoy Üniversitesi · TRRockefeller University · USWashington University in St. Louis · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Yale Center for Mendelian GenomicsUM1HG006504 · NHGRI · YALE UNIVERSITY · PI GERSTEIN, MARK BENDER, GUNEL, MURAT · 2016 to 2020
$14.8M
Genetic determinants of human heterotaxy and aortic arch malformationU01HL098162 · NHLBI · YALE UNIVERSITY · PI BRUECKNER, MARTINA, GRUBER, PETER J · 2009 to 2024
$5.9M
Cilia in Heart Development and DiseaseR35HL145249 · NHLBI · YALE UNIVERSITY · PI BRUECKNER, MARTINA · 2019 to 2025
$5.2M
NHGRI Genome Sequencing Program Coordinating CenterU24HG008956 · NHGRI · RUTGERS, THE STATE UNIV OF N.J. · PI BUYSKE, STEVEN G, MATISE, TARA C. · 2016 to 2020
$4.9M
Integrative Genomic Analysis of Congenital Heart DiseaseR00HL143036 · NHLBI · WASHINGTON UNIVERSITY · PI JIN, SHENG CHIH · 2020 to 2022
$730k
Integrative Genomic Analysis of Congenital Heart DiseaseK99HL143036 · NHLBI · ROCKEFELLER UNIVERSITY · PI JIN, SHENG CHIH · 2019 to 2019
$178k
NCATS NIH HHS UL1 TR001863NHGRI NIH HHS U24 HG008956NHGRI NIH HHS UM1 HG006504NHLBI NIH HHS K99 HL143036NHLBI NIH HHS R00 HL143036NHLBI NIH HHS R35 HL145249NHLBI NIH HHS U01 HL098162
6 · The paper itself

Abstract

backgroundsWhile many studies agree that consanguinity increases the rate of congenital heart disease (CHD), few genome analyses have been conducted with consanguineous CHD cohorts.

methodsWe recruited 73 CHD probands from consanguineous families in Turkey and used whole-exome sequencing (WES) to identify genetic lesions in these patients.

resultsOn average, each patient had 6.95 rare damaging homozygous variants, 0.68 of which are loss-of-function (LoF) variants. Seven patients (9.6%) carried damaging homozygous variants in five causal CHD genes. Six of those patients exhibited laterality defects (six HTX and one D-TGA). Three additional patients (4.1%) harbored other types of CHD-associated genomic alterations, which overall explained 13.7% (10/73) of the cohort. The contribution from recessive variants in our cohort is higher than 1.8% reported from a cohort of 2871 CHD subjects where 5.6% of subjects met the criteria for consanguinity.

conclusionsOur WES screen of a Turkish consanguineous population with structural CHD revealed its unique genetic architecture. Six of seven damaging homozygous variants in CHD causal genes occur in the setting of laterality defects implies a strong contribution from consanguinity to these defects specifically. Our study thus provided valuable information about the genetic landscape of CHD in consanguineous families in Turkey.

Indexed as

Heart Defects, CongenitalConsanguinityExome SequencingHumansMutationTurkeycongenital heart diseaseconsanguinitygeneticsmutation

Identifiers

PMID35481623
PMCPMC9184665
OpenAlexW4225009035

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.