Evidence map›Paper›PMID 35481287›Full record

ArticleOncoimmunology2022

Intratumoral T-cell repertoires in DNA mismatch repair-proficient and -deficient colon tumors containing high or low numbers of tumor-infiltrating lymphocytes.

Jin K Kim, Chin-Tung Chen, Ajaratu Keshinro, Asama Khan, Canan Firat, Chad Vanderbilt, Neil Segal, Zsofia Stadler, Jinru Shia, Vinod P Balachandran and 1 more

Abstract read
In one paragraph

Article in Oncoimmunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. A laminin α4-CD8Oncoimmunology · 2025
    Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Neoantigens: promising targets for cancer therapy.Signal transduction and targeted therapy · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Jin K KimDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York, USA.ORCID 0000-0002-4373-1431
Chin-Tung ChenDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Ajaratu KeshinroDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Asama KhanDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Canan FiratDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Chad VanderbiltDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Neil SegalDepartment of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Zsofia StadlerDepartment of Medicine, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Jinru ShiaDepartment of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York, USA.ORCID 0000-0002-4351-2511
Vinod P BalachandranDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York, USA.
Martin R WeiserDepartment of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York, USA.

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Elisa de Stanchina · 1985 to 2026
$347.4M
SURGICAL ONCOLOGY RESEARCH TRAINING PROGRAMT32CA009501 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Babak J Mehrara · 1985 to 2026
$7.7M
NCI NIH HHS P30 CA008748NCI NIH HHS T32 CA009501
6 · The paper itself

Abstract

Colon tumors with deficient DNA mismatch repair (dMMR) are generally infiltrated by T cells more densely than tumors with proficient mismatch repair (pMMR). However, high numbers of tumor-infiltrating lymphocytes (TILs) are found in select pMMR tumors, and low numbers of TILs are seen in select dMMR tumors. In this study, we compared T-cell repertoires in 20 pMMR and 27 dMMR colon tumors with high and low TIL counts. We found that T cells in dMMR tumors are more clonal and their repertoire is less rich compared with T cells in pMMR tumors. In the dMMR group, T cells in TIL-high tumors were more clonal and their repertoire was less rich compared with T cells in TIL-low tumors, but in the pMMR group, T-cell diversity in TIL-high tumors was comparable to T-cell diversity in TIL-low tumors. These findings suggest that T cells clonally expand in dMMR tumors, possibly in response to MMR deficiency-induced tumor neoantigens.

Indexed as

Colonic NeoplasmsDNA Mismatch RepairDNAHumansLymphocytes, Tumor-InfiltratingPrognosisT-LymphocytesDNAColon cancermismatch repair deficiencyT-cell repertoiretumor-infiltrating-lymphocytestumor mutational burden

Identifiers

PMID35481287
PMCPMC9037499

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.