Evidence map›Paper›PMID 35480140›Full record

ArticleBioMed research international2022

Development of a 5-Gene Signature to Evaluate Lung Adenocarcinoma Prognosis Based on the Features of Cancer Stem Cells.

Renping Wan, Hongliang Liao, Jingting Liu, Lin Zhou, Yingqiu Yin, Tianhao Mu, Jie Wei

RetractedAbstract readRetracted Publication
In one paragraph

Article in BioMed research international, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Renping WanDepartment of Thoracic Surgery, Yuebei People's Hospital, 133 Huimin South Road, Wujiang District, Shaoguan City, Guangdong Province, China 440200.
Hongliang LiaoDepartment of Thoracic Surgery, Yuebei People's Hospital, 133 Huimin South Road, Wujiang District, Shaoguan City, Guangdong Province, China 440200.
Jingting LiuDepartment of Thoracic Surgery, Yuebei People's Hospital, 133 Huimin South Road, Wujiang District, Shaoguan City, Guangdong Province, China 440200.
Lin ZhouDepartment of Thoracic Surgery, Yuebei People's Hospital, 133 Huimin South Road, Wujiang District, Shaoguan City, Guangdong Province, China 440200.
Yingqiu YinDepartment of Respiratory Medicine, Yuebei People's Hospital, 133 Huimin South Road, Wujiang District, Shaoguan City Guangdong Province, China 440200.
Tianhao MuDepartment of Oncology, HaploX Biotechnology, 8/F, Aotexin Power Building, No. 1, Songpingshan Road, High Tech North District, Nanshan District, Shenzhen City, Guangdong Province, China 440300.ORCID https://orcid.org/0000-0003-0177-7121
Jie WeiDepartment of Respiratory Medicine, Yuebei People's Hospital, 133 Huimin South Road, Wujiang District, Shaoguan City Guangdong Province, China 440200.ORCID https://orcid.org/0000-0003-0152-3826

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cancer stem cells (CSCs) can induce recurrence and chemotherapy resistance of lung adenocarcinoma (LUAD). Reliable markers identified based on CSC characteristic of LUAD may improve patients' chemotherapy response and prognosis. OCLR was used to calculate mRNA expression-based stemness index (mRNAsi) of LUAD patients' data in TCGA. Association analysis of mRNAsi was performed with clinical features, somatic mutation, and tumor immunity. A prognostic prediction model was established with LASSO Cox regression. Kaplan-Meier Plotter (KM-plotter) and time-dependent ROC were applied to assess signature performance. For LUAD, univariate and multivariate Cox analysis was performed to identify independent prognostic factors. LUAD tissues showed a noticeably higher mRNAsi in than nontumor tissues, and it showed significant differences in T, N, M, AJCC stages, and smoking history. The most frequently mutated gene was TP53, with a higher mRNAsi relating to more frequent mutation of TP53. The mRNAsi was significantly negatively correlated with immune score, stromal score, and ESTIMATE score in LUAD. The blue module was associated with mRNAsi. The 5-gene signature was confirmed as an independent indicator of LUAD prognosis that could promote personalized treatment of LUAD and accurately predict overall survival (OS) of LUAD patients.

Indexed as

Adenocarcinoma of LungLung NeoplasmsGene Expression Regulation, NeoplasticHumansKaplan-Meier EstimateNeoplastic Stem CellsPrognosis

Identifiers

PMID35480140
PMCPMC9036162

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.