Evidence map›Paper›PMID 35478280›Full record

ArticleMicrobiologyOpen2022

Variation in pH gradients and FLO11 expression in mat biofilms from environmental isolates of the yeast Saccharomyces cerevisiae.

Amy L Forehand, Dulguun Myagmarsuren, Ziyan Chen, Helen A Murphy

Abstract read
In one paragraph

Article in MicrobiologyOpen, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Amy L ForehandDepartment of Biology, William & Mary, Williamsburg, Virginia, USA.
Dulguun MyagmarsurenDepartment of Biology, William & Mary, Williamsburg, Virginia, USA.
Ziyan ChenDepartment of Biology, William & Mary, Williamsburg, Virginia, USA.
Helen A MurphyDepartment of Biology, William & Mary, Williamsburg, Virginia, USA.ORCID 0000-0002-4363-4543

Funding

The Evolution and Genetics of a Complex Fungal Virulence TraitR15GM122032 · NIGMS · COLLEGE OF WILLIAM AND MARY · PI MURPHY, HELEN ANNE · 2017 to 2017
$307k
NIGMS NIH HHS R15 GM122032
6 · The paper itself

Abstract

Saccharomyces cerevisiae produces a multicellular phenotype, known as a mat, on a semi-solid medium. This biofilm phenotype was first described in the lab strain Σ1278b and has been analyzed mostly in this same background. Yeast cells form a mat by spreading across the medium and adhering to each other and the surface, in part through the variegated expression of the cell adhesion, FLO11. This process creates a characteristic floral pattern and generates pH and glucose gradients outward from the center of the mat. Mats are encapsulated in a liquid which may aid in surface spreading and diffusion. Here, we examine thirteen environmental isolates that vary visually in the phenotype. We predicted that mat properties were universal and increased morphological complexity would be associated with more extreme trait values. Our results showed that pH varied significantly among strains, but was not correlated to mat complexity. Only two isolates generated significant liquid boundaries and neither produced visually complex mats. In five isolates, we tracked the initiation of FLO11 using green fluorescent protein (GFP) under the control of the endogenous promoter. Strains varied in when and how much GFP was detected, with increased signal associated with increased morphological complexity. Generally, the signal was strongest in the center of the mat and absent at the expanding edge. Our results show that traits discovered in one background vary and exist independently of mat complexity in natural isolates. The environment may favor different sets of traits, which could have implications for how this yeast adapts to its many ecological niches.

Indexed as

Saccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsBiofilmsCulture MediaMembrane GlycoproteinsProton-Motive ForceCulture MediaFLO11 protein, S cerevisiaeMembrane GlycoproteinsSaccharomyces cerevisiae ProteinsadhesinbiofilmFLO11multicellularyeast mat

Identifiers

PMID35478280
PMCPMC9059236

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.