Evidence map›Paper›PMID 35477441›Full record

ArticleFungal biology and biotechnology2022

Characterisation of ascocorynin biosynthesis in the purple jellydisc fungus Ascocoryne sarcoides.

Carsten Wieder, Roberta Peres da Silva, Jessica Witts, Christof Martin Jäger, Elena Geib, Matthias Brock

Open access · goldAbstract read
In one paragraph

Article in Fungal biology and biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Carsten Wieder *Fungal Biology Group, School of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
Roberta Peres da Silva *Fungal Biology Group, School of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
Jessica WittsFungal Biology Group, School of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
Christof Martin JägerSustainable Process Technologies Research Group, Faculty of Engineering, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
Elena GeibFungal Biology Group, School of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
Matthias BrockFungal Biology Group, School of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK. Matthias.brock@nottingham.ac.uk.
University of Nottingham · GBUniversity of Exeter · GB

Funding

Biotechnology and Biological Sciences Research Council 1945087Medical Research Council MR/N017528/1
6 · The paper itself

Abstract

backgroundNon-ribosomal peptide synthetase-like (NRPS-like) enzymes are highly enriched in fungal genomes and can be discriminated into reducing and non-reducing enzymes. Non-reducing NRPS-like enzymes possess a C-terminal thioesterase domain that catalyses the condensation of two identical aromatic α-keto acids under the formation of enzyme-specific substrate-interconnecting core structures such as terphenylquinones, furanones, butyrolactones or dioxolanones. Ascocoryne sarcoides produces large quantities of ascocorynin, which structurally resembles a terphenylquinone produced from the condensation of p-hydroxyphenylpyruvate and phenylpyruvate. Since the parallel use of two different substrates by a non-reducing NRPS-like enzyme appeared as highly unusual, we investigated the biosynthesis of ascocorynin in A. sarcoides.

resultsHere, we searched the genome of A. sarcoides for genes coding for non-reducing NRPS-like enzymes. A single candidate gene was identified that was termed acyN. Heterologous gene expression confirmed that AcyN is involved in ascocorynin production but only produces the non-hydroxylated precursor polyporic acid. Although acyN is embedded in an ascocorynin biosynthesis gene cluster, a gene encoding a monooxygenase required for the hydroxylation of polyporic acid was not present. Expression analyses of all monooxygenase-encoding genes from A. sarcoides identified a single candidate that showed the same expression pattern as acyN. Accordingly, heterologous co-expression of acyN and the monooxygenase gene resulted in the production of ascocorynin. Structural modelling of the monooxygenase suggests that the hydrophobic substrate polyporic acid enters the monooxygenase from a membrane facing entry site and is converted into the more hydrophilic product ascocorynin, which prevents its re-entry for a second round of hydroxylation.

conclusionThis study characterises the first naturally occurring polyporic acid synthetase from an ascomycete. It confirms the high substrate and product specificity of this non-reducing NRPS-like enzyme and highlights the requirement of a monooxygenase to produce the terphenylquinone ascocorynin.

Indexed as

Biosynthesis gene clusterHeterologous gene expressionIn vitro assaysMonooxygenaseNRPS-like enzymes

Identifiers

PMID35477441
PMCPMC9047271
OpenAlexW4225103662

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.