Evidence map›Paper›PMID 35475905›Full record

ArticleMemorias do Instituto Oswaldo Cruz2022

Molecular aspects of Chikungunya virus infections in cancer patients.

Débora Familiar-Macedo, Bianca Ervatti Gama, Vanessa Erichsen Emmel, Gabriela Vera-Lozada, Eliana Abdelhay, Ianick Souto Martins, Rocio Hassan

Open access · diamondAbstract read
In one paragraph

Article in Memorias do Instituto Oswaldo Cruz, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Débora Familiar-MacedoInstituto Nacional de Câncer, Centro de Transplante de Medula Óssea, Laboratório de Oncovirologia, Rio de Janeiro, RJ, Brasil.ORCID http://orcid.org/0000-0002-9229-5912
Bianca Ervatti GamaInstituto Nacional de Câncer, Centro de Transplante de Medula Óssea, Laboratório de Oncovirologia, Rio de Janeiro, RJ, Brasil.
Vanessa Erichsen EmmelInstituto Nacional de Câncer, Centro de Transplante de Medula Óssea, Laboratório de Oncovirologia, Rio de Janeiro, RJ, Brasil.
Gabriela Vera-LozadaInstituto Nacional de Câncer, Centro de Transplante de Medula Óssea, Laboratório de Oncovirologia, Rio de Janeiro, RJ, Brasil.
Eliana AbdelhayInstituto Nacional de Câncer, Centro de Transplante de Medula Óssea, Laboratório de Células-Tronco, Rio de Janeiro, RJ, Brasil.
Ianick Souto MartinsInstituto Nacional de Câncer, Comissão de Controle de Infecções Hospitalares, Rio de Janeiro, RJ, Brasil.
Rocio HassanInstituto Nacional de Câncer, Centro de Transplante de Medula Óssea, Laboratório de Oncovirologia, Rio de Janeiro, RJ, Brasil.
Instituto Nacional de Câncer - INCA · BRUniversidade Federal Fluminense · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundChikungunya virus (CHIKV) is an arbovirus that can cause chronic and debilitating manifestations. The first autochthonous case in Rio de Janeiro state was diagnosed in 2015, and an outbreak was declared in 2016.

objectiveThe aim of this work was to evaluate CHIKV viral load in serum, plasma and urine in cancer patients to determine the best sample for diagnosis, as well as perform molecular characterisation and phylogenetic analysis of circulating strains.

methodsPaired serum, plasma and urine collected from 31 cancer patients were tested by real-time quantitative polymerase chain reaction (qPCR) and a segment of the CHIKV E1 gene was sequenced.

findingsWe detected 11 CHIKV+ oncological patients. Paired samples analyses of nine patients showed a different pattern of detection. Also, a higher viral load in plasma (6.84 log10) and serum (6.07 log10) vs urine (3.76 log10) was found. Phylogenetic analysis and molecular characterisation revealed East/Central/Southern Africa (ECSA) genotype circulation and three amino acids substitutions (E1-K211T, E1-M269V, E1-T288I) in positive patients. MAIN

conclusionThe results indicate the bioequivalence of serum and plasma for CHIKV diagnosis, with urine being an important complement. ECSA genotype was circulating among patients in the period of the 2016 outbreak with K211T, M269V and T288I substitution.

Indexed as

Chikungunya FeverChikungunya virusNeoplasmsBrazilHumansPhylogeny

Identifiers

PMID35475905
PMCPMC9037814
OpenAlexW4226082150

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.