Evidence map›Paper›PMID 35474893›Full record

ArticleCell reports methods2021

Development of mammalian cell logic gates controlled by unnatural amino acids.

Emily M Mills, Victoria L Barlow, Arwyn T Jones, Yu-Hsuan Tsai

Open access · goldAbstract read
In one paragraph

Article in Cell reports methods, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
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  9. Review
  10. Tuning tRNAs for improved translation.Frontiers in genetics · 2024
    Review
  11. Split aminoacyl-tRNA synthetases for proximity-induced stop codon suppression.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Genetic Code Expansion in Mammalian Cells Through Quadruplet Codon Decoding.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Emily M MillsSchool of Chemistry, Cardiff University, Main Building, Park Place, Cardiff, Wales CF10 3AT, UK.
Victoria L BarlowSchool of Chemistry, Cardiff University, Main Building, Park Place, Cardiff, Wales CF10 3AT, UK.
Arwyn T JonesSchool of Pharmacy and Pharmaceutical Sciences, Cardiff University, Redwood Building, Cardiff, Wales CF10 3NB, UK.
Yu-Hsuan TsaiSchool of Chemistry, Cardiff University, Main Building, Park Place, Cardiff, Wales CF10 3AT, UK.
Cardiff University · GBShenzhen Bay Laboratory · CN

Funding

Biotechnology and Biological Sciences Research Council BB/P009506/1Medical Research Council MR/N020294/1
6 · The paper itself

Abstract

Mammalian cell logic gates hold great potential for wide-ranging applications. However, most of those currently available are controlled by drug(-like) molecules with inherent biological activities. To construct truly orthogonal circuits and artificial regulatory pathways, biologically inert molecules are ideal molecular switches. Here, we applied genetic code expansion and engineered logic gates controlled by two biologically inert unnatural amino acids. Genetic code expansion relies on orthogonal aminoacyl-tRNA synthetase/tRNA pairs for co-translational and site-specific unnatural amino acid incorporation conventionally in response to an amber (UAG) codon. By screening 11 quadruplet-decoding pyrrolysyl tRNA variants from the literature, we found that all variants decoding CUAG or AGGA tested here are functional in mammalian cells. Using a quadruplet-decoding orthogonal pair together with an amber-decoding pair, we constructed logic gates that can be successfully controlled by two different unnatural amino acids, expanding the scope of genetic code expansion and mammalian cell logic circuits.

Indexed as

Amino AcidsAmino Acyl-tRNA SynthetasesAnimalsCodonGenetic CodeMammalsRNA, TransferAmino AcidsAmino Acyl-tRNA SynthetasesCodonRNA, Transfergenetic code expansionlogic gatenon-canonical amino acidpyrrolysyl tRNAquadruplet codonsynthetic biologyunnatural amino acid

Identifiers

PMID35474893
PMCPMC9017196
OpenAlexW3199972593

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.