Evidence map›Paper›PMID 35474751›Full record

ArticleCell reports. Medicine2022

Rapid synchronous type 1 IFN and virus-specific T cell responses characterize first wave non-severe SARS-CoV-2 infections.

Aneesh Chandran, Joshua Rosenheim, Gayathri Nageswaran, Leo Swadling, Gabriele Pollara, Rishi K Gupta, Alice R Burton, José Afonso Guerra-Assunção, Annemarie Woolston, Tahel Ronel and 19 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports. Medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
6.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 64 citations in OpenAlex.

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  12. CD4Science advances · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 6 institutions in 1 country.

Aneesh ChandranDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Joshua RosenheimDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Gayathri NageswaranDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Leo SwadlingDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Gabriele PollaraDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Rishi K GuptaInstitute for Global Health, University College London, London WC1E 6BT, UK.
Alice R BurtonDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
José Afonso Guerra-AssunçãoDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Annemarie WoolstonDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Tahel RonelDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Corinna PadeBlizard Institute, Barts and the London School of Medicine and Dentistry, Queen Mary University of London, London E1 4NS, UK.
Joseph M GibbonsBlizard Institute, Barts and the London School of Medicine and Dentistry, Queen Mary University of London, London E1 4NS, UK.
Blanca Sanz-Magallon Duque De EstradaDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Marc Robert de MassyDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Matthew WhelanDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Amanda SemperNational Infection Service, Public Health England, Porton Down, Salisbury SP4 0JQ, UK.
Tim BrooksNational Infection Service, Public Health England, Porton Down, Salisbury SP4 0JQ, UK.
Daniel M AltmannDepartment of Immunology and Inflammation, Imperial College London, London SW7 2BX, UK.
Rosemary J BoytonDepartment of Infectious Disease, Imperial College London, London SW7 2BX, UK.
Áine McKnightBlizard Institute, Barts and the London School of Medicine and Dentistry, Queen Mary University of London, London E1 4NS, UK.
Gabriella CapturInstitute of Cardiovascular Sciences, University College London, London WC1E 6BT, UK.
Charlotte ManistyInstitute of Cardiovascular Sciences, University College London, London WC1E 6BT, UK.
Thomas Alexander TreibelInstitute of Cardiovascular Sciences, University College London, London WC1E 6BT, UK.
James C MoonInstitute of Cardiovascular Sciences, University College London, London WC1E 6BT, UK.
Gillian S TomlinsonDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Mala K MainiDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Benjamin M ChainDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
Mahdad NoursadeghiDivision of Infection and Immunity, University College London, London WC1E 6BT, UK.
COVIDsortium Investigators
University College London · GBQueen Mary University of London · GBPublic Health England · GBGuy's and St Thomas' NHS Foundation Trust · GBImperial College London · GBMRC Unit for Lifelong Health and Ageing · GB

Funding

British Heart Foundation AA/18/6/34223British Heart Foundation FS/19/35/34374British Heart Foundation FS/CRTF/21/24143British Heart Foundation SP/20/2/34841Department of Health DRF-2018-11-ST2-004Department of Health NIHR134607Medical Research Council MC_PC_20060Medical Research Council MR/N007727/1Medical Research Council MR/R02622X/1Medical Research Council MR/S019553/1Medical Research Council MR/V036939/1Medical Research Council MR/W020610/1MRF_ MRF-044-0001-RG-SWADLWellcome Trust 207511/Z/17/ZWellcome Trust 214191/Z/18/Z
6 · The paper itself

Abstract

Effective control of SARS-CoV-2 infection on primary exposure may reveal correlates of protective immunity to future variants, but we lack insights into immune responses before or at the time virus is first detected. We use blood transcriptomics, multiparameter flow cytometry, and T cell receptor (TCR) sequencing spanning the time of incident non-severe infection in unvaccinated virus-naive individuals to identify rapid type 1 interferon (IFN) responses common to other acute respiratory viruses and cell proliferation responses that discriminate SARS-CoV-2 from other viruses. These peak by the time the virus is first detected and sometimes precede virus detection. Cell proliferation is most evident in CD8 T cells and associated with specific expansion of SARS-CoV-2-reactive TCRs, in contrast to virus-specific antibodies, which lag by 1-2 weeks. Our data support a protective role for early type 1 IFN and CD8 T cell responses, with implications for development of universal T cell vaccines.

Indexed as

COVID-19Interferon Type ICD8-Positive T-LymphocytesFlow CytometryHumansSARS-CoV-2Interferon Type ICD8 T cellsnon-severe SARS-CoV-2 infectiontype 1 interferon

Identifiers

PMID35474751
PMCPMC8895494
OpenAlexW4214871180

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.